Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680695
Identifier: 37680695
GI number: 37680695
Start: 2541178
End: 2541612
Strand: Direct
Name: 37680695
Synonym: VV2511
Alternate gene names: NA
Gene position: 2541178-2541612 (Clockwise)
Preceding gene: 37680694
Following gene: 37680697
Centisome position: 75.75
GC content: 46.21
Gene sequence:
>435_bases ATGTCTGATGTCGACATGAGTCCAAAAACACAGCAGTACCGCTATTTGGCATTGTTTGGCAATTTATCGCTGTTACTGTG GGTTGTACTTTGGCAATTGGCGTTATCGCCACACCCTCATTTAAGTTCCACTACCCTCGCGATCGCATGGTGTATTCCCC TACTTTTACCATTACCAGGTATTTTGGCGGGTAAGCCCTACACCCACGCTTGGGCAAACTTTGTTTTAATGCTCTATTTT TTACACGCTTTAACGATTTTGTACGTCGATGGTGGTGAGCGTTGGCTGGCTTTGGTCGAGCTGTTGCTCACCACGTTAGG CTTTGCTGGCAATATTCTCTTTGCGAGAGCGCGCGGCCAAGAGCTAGGAATGAAGTTGAAAAAGCTATCGCAAGTCGAAA AAGAAGAGAAAGCGAAGTTTGGTAATCAGCCGTAA
Upstream 100 bases:
>100_bases TGTTGGTCACGAAAGCTCACTCACCACAGAAGAAATTCGCTTGGCGCAACAATTAGGAAAGCGCTTGGCACTGGTTGCCA AAAAGCAAAAGGAGTCGTAG
Downstream 100 bases:
>100_bases CATAATGGCTTTTGCCCTCATTGTCGCAATAAGCATAAAAAACAGCCAACGATCAACGTTGGCTGTTTTTATATCTAACT ATTCACAGTATTAGAAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSDVDMSPKTQQYRYLALFGNLSLLLWVVLWQLALSPHPHLSSTTLAIAWCIPLLLPLPGILAGKPYTHAWANFVLMLYF LHALTILYVDGGERWLALVELLLTTLGFAGNILFARARGQELGMKLKKLSQVEKEEKAKFGNQP
Sequences:
>Translated_144_residues MSDVDMSPKTQQYRYLALFGNLSLLLWVVLWQLALSPHPHLSSTTLAIAWCIPLLLPLPGILAGKPYTHAWANFVLMLYF LHALTILYVDGGERWLALVELLLTTLGFAGNILFARARGQELGMKLKKLSQVEKEEKAKFGNQP >Mature_143_residues SDVDMSPKTQQYRYLALFGNLSLLLWVVLWQLALSPHPHLSSTTLAIAWCIPLLLPLPGILAGKPYTHAWANFVLMLYFL HALTILYVDGGERWLALVELLLTTLGFAGNILFARARGQELGMKLKKLSQVEKEEKAKFGNQP
Specific function: Unknown
COG id: COG3308
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16176; Mature: 16045
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVDMSPKTQQYRYLALFGNLSLLLWVVLWQLALSPHPHLSSTTLAIAWCIPLLLPLPG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC ILAGKPYTHAWANFVLMLYFLHALTILYVDGGERWLALVELLLTTLGFAGNILFARARGQ HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHCCHHHEECCCH ELGMKLKKLSQVEKEEKAKFGNQP HHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SDVDMSPKTQQYRYLALFGNLSLLLWVVLWQLALSPHPHLSSTTLAIAWCIPLLLPLPG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC ILAGKPYTHAWANFVLMLYFLHALTILYVDGGERWLALVELLLTTLGFAGNILFARARGQ HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHCCHHHEECCCH ELGMKLKKLSQVEKEEKAKFGNQP HHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA