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The map label for this gene is rimK [H]

Identifier: 37680476

GI number: 37680476

Start: 2308658

End: 2309404

Strand: Direct

Name: rimK [H]

Synonym: VV2292

Alternate gene names: 37680476

Gene position: 2308658-2309404 (Clockwise)

Preceding gene: 37680475

Following gene: 37680477

Centisome position: 68.82

GC content: 45.65

Gene sequence:

>747_bases
ATGTTTATAAGATTGACGCCAGTACTCGCTCTCGTTTTGTTATCTGGCTGTACTTTAACCAATGGTGAGCAATATCATCA
GAAAACCCTGACCGCCCTCCAAGACTCTGAGGCTCGTATTACGAATAAGATAGAGAATCTCACTCTGCAATCCTCAAACC
AAGTCGATTACATCGAGAGCCTTGAGACTCAAATTACCGAGTTACAAAAACAAGTTGAACATCTTCAGTTGACTCAACAG
CAAAGTTTGGCGTCGTCTGAAGAGAAAAAACCAGAACCAAAAGTCATTGCCGCGCCACCAGCACCAGCCAAAAATCAAAT
CATCTTGGGTGCGATTGAAAAAGTGACCATTGAGTCGATCAATCAGTCTTTTGATGCACGTGTTGATACCGGGGCAACCA
CCTCTTCACTCAATGCCGTGGACATCGAAATGTTCGAGCGCAATGGTAAAGATTGGGTTCGCTTCCACCTCTCAGATCCA
GAACAACCTGGCACTGACCAAAACTGGATTGAAGCCCCCGTGATTCGTTATGTGAAAATTCGTCAGTCGACCAACGACGA
TACCGAACGCCGCGCAGTCGTCGAGCTGTGGGTCAAAGTGGGCGCAATCAAAGAAAAGGCGCAATTTACATTGGCAGACC
GCTCACAAATGAGCCATCCCGTTCTTTTAGGTCGTGAGTTTATTCGCGATATTGCTCTTGTTGACGTTAGTCGCAGTTAC
ATTCAAACCGGACAAAAGAAAAAATAG

Upstream 100 bases:

>100_bases
CACTAAACCCTAACAAGAGGATGCTTCACGCATCCTTTTTTATACGCTACACTCCTCTTTACAATAACTTATTCCCCTAA
TTCACTTTTTAAGGCATTCA

Downstream 100 bases:

>100_bases
GTAGGCTATGACTTCCCGAGTTCCCTTTTATCTTTCTATCATCCTGCTGATTGTCGCAGGGATAACACTCAGCGTGTTTC
GCCATCAAACCTATGGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MFIRLTPVLALVLLSGCTLTNGEQYHQKTLTALQDSEARITNKIENLTLQSSNQVDYIESLETQITELQKQVEHLQLTQQ
QSLASSEEKKPEPKVIAAPPAPAKNQIILGAIEKVTIESINQSFDARVDTGATTSSLNAVDIEMFERNGKDWVRFHLSDP
EQPGTDQNWIEAPVIRYVKIRQSTNDDTERRAVVELWVKVGAIKEKAQFTLADRSQMSHPVLLGREFIRDIALVDVSRSY
IQTGQKKK

Sequences:

>Translated_248_residues
MFIRLTPVLALVLLSGCTLTNGEQYHQKTLTALQDSEARITNKIENLTLQSSNQVDYIESLETQITELQKQVEHLQLTQQ
QSLASSEEKKPEPKVIAAPPAPAKNQIILGAIEKVTIESINQSFDARVDTGATTSSLNAVDIEMFERNGKDWVRFHLSDP
EQPGTDQNWIEAPVIRYVKIRQSTNDDTERRAVVELWVKVGAIKEKAQFTLADRSQMSHPVLLGREFIRDIALVDVSRSY
IQTGQKKK
>Mature_248_residues
MFIRLTPVLALVLLSGCTLTNGEQYHQKTLTALQDSEARITNKIENLTLQSSNQVDYIESLETQITELQKQVEHLQLTQQ
QSLASSEEKKPEPKVIAAPPAPAKNQIILGAIEKVTIESINQSFDARVDTGATTSSLNAVDIEMFERNGKDWVRFHLSDP
EQPGTDQNWIEAPVIRYVKIRQSTNDDTERRAVVELWVKVGAIKEKAQFTLADRSQMSHPVLLGREFIRDIALVDVSRSY
IQTGQKKK

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG4067

COG function: function code O; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008503
- InterPro:   IPR009007
- InterPro:   IPR004666 [H]

Pfam domain/function: PF05618 DUF785; PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 27939; Mature: 27939

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIRLTPVLALVLLSGCTLTNGEQYHQKTLTALQDSEARITNKIENLTLQSSNQVDYIES
CEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCEECCCCCHHHHHH
LETQITELQKQVEHLQLTQQQSLASSEEKKPEPKVIAAPPAPAKNQIILGAIEKVTIESI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEHHHHHHHHHH
NQSFDARVDTGATTSSLNAVDIEMFERNGKDWVRFHLSDPEQPGTDQNWIEAPVIRYVKI
HHHHCCCCCCCCCCCCCCCEEHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
RQSTNDDTERRAVVELWVKVGAIKEKAQFTLADRSQMSHPVLLGREFIRDIALVDVSRSY
HCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
IQTGQKKK
HHCCCCCC
>Mature Secondary Structure
MFIRLTPVLALVLLSGCTLTNGEQYHQKTLTALQDSEARITNKIENLTLQSSNQVDYIES
CEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCEECCCCCHHHHHH
LETQITELQKQVEHLQLTQQQSLASSEEKKPEPKVIAAPPAPAKNQIILGAIEKVTIESI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEHHHHHHHHHH
NQSFDARVDTGATTSSLNAVDIEMFERNGKDWVRFHLSDPEQPGTDQNWIEAPVIRYVKI
HHHHCCCCCCCCCCCCCCCEEHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
RQSTNDDTERRAVVELWVKVGAIKEKAQFTLADRSQMSHPVLLGREFIRDIALVDVSRSY
HCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
IQTGQKKK
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA