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The map label for this gene is yrvJ [H]

Identifier: 37520091

GI number: 37520091

Start: 560625

End: 562385

Strand: Reverse

Name: yrvJ [H]

Synonym: gll0522

Alternate gene names: 37520091

Gene position: 562385-560625 (Counterclockwise)

Preceding gene: 37520093

Following gene: 37520090

Centisome position: 12.07

GC content: 68.31

Gene sequence:

>1761_bases
ATGAGCGCCATGCGGTTTGCCACTGCACTTTTCGTATCGGTCTGGCTGGGGGTGCCCCAGGCCGCGGCTGCCCTGCGACT
GGTCTATCCTCCCGATGGGCACCGCACCGAAAGTGCCAGCATTTATTTCATCGGTACGGCCCCCGGGGCGGGCAGTCTGC
AGGTCAACGGCCAAAAAGTAGCGCGCCACCCGGCGGGCCATTTTGCCTGGACGGTGCCGCTGCAGTCGGGGATCAACACT
TTTCGCTGGACCTTCCGGGGGACGCATGGGGCGAGCGAAACCGTCGAGCGGCAGGTCATCCGCCAGAGTCCGAATCCGCC
GGTACCCGGGGATCGGTTGTTTCTAGAAGCGCGCCTGCCGCGCGGGGAGCAGCGGGTGCTGCCTTTCGAGCCGGTTTGCT
TTGAGGCGCGGGCGACTCCCGGCGGCCAATTGCAGGCGCGCGTCGGGGAACAGTCGATTGCCCTTGCGGAGGCCGCCCCG
TTTCGGGAGCCGGGGGACGCGGCGGCGGTGCTGAGTGGCGGTGCGGCCGGCCGCTCCCTTGTCGGCTTCTATCGCGGCTG
TCTGGCGGCGGCCGAATCGTGGCGCGATGTCGAGCCGCGCCTGGATTTTCGCCGGCGCGGCCAGGTACTCAGCTCCCCGG
TGCCCGCCACGATTACCAGTCTCGATCCGCGCCAGCTGACCGTGATCGAAGTCACCGCCGCCGAAGCGATCGTCCGGGCC
GGGCCGGGGGCCGAATTTGCGCGGCTTTCGCCCCTCACGCGCGGGGTGCGCTCGCGGGTCACCGCCGTGAGTGGCGACTG
GCTGCGCCTGCAGGGCGAAGGTTGGATTGCCAGGGCGGATGGGATGGCATTGCCCGTGGGCACCGCGCTGCCGACCAGTG
CGGTGGGGGCGCTGCGCACCCGGGTGACGACGGCGGGCAGCGAACTTATCGTGCCGCTGGAGATGCGTTTGCCGGCGAGT
GTGCGCCAGGAGGAGCACCGGCTCATCGTCACCCTCTGGGGGGCACAGGCGCGCACGGATTTGATTCGTTTCGACGCGCC
CGACCCGCTCATCCGCTCGGTGCAGTGGGAGACGGTCTCCCCGGAGGGCGTGCGCTTTTATATCGATCTGCGCGAGCGGC
GGCAGTGGGGCTACCAGTTGCGCTACGAGGACAATGCGCTGGTGGTGGCCCTGCGCAAGGGGCCGCGGGTAGGCCGCGGG
CTTGCCGGGGCGCGGGTGATGATTGATCCTGGCCATGGCGGCGCCCAGACGGGCTCGATCGGTCCCTCGGGCATCCCCGA
AAAAACCGTCAATCTTGCGATCGCTTTGCGCCTGGGTGAACAGTTGCGCCGGGCCGGGGCAGAGGTACTTTTTACCCGCA
CCGCCGATGTGGACGTGCCGCTGGCCGAGCGCTCCCGGATGCTGGAGGCGAAGCAACCCACGGTGTTTTTGAGCCTGCAC
CACAACGCCCTGCCGGATGCGGGCGACCCGTTGCGCCAGTACGGCACTTCGGTGTACTGGTACCACATGCAAAGCCGTGA
ACTGGCGGAGGTGCTGCACCGTCAGTTGCTCCGGGACCTCGGGCGTCCCGATTACGGTCTCTATTGGGACAGTCTGGCGG
TGATCCGCCCGACAGCCGCCCCGGCAGTACTGCTCGAACTCGGTTTTATGACCCACCCCGACGAATACACGCTCATCACT
GCACCGGCTTACCAGGAGCGCATCGCCCGCGCGCTGACCCGCGGGCTGGAGCGTTGGCTGCACGCCGAGCGGCCGGAGTG
A

Upstream 100 bases:

>100_bases
GACCAGCTAGGAGTCGGAACCCTATGAAACGACTCACATCGTCCTTAGGTTCATGCTACCCCAAGTAACGTAAACAAACT
CAATAATTTGTAAGAAGCAA

Downstream 100 bases:

>100_bases
CACCGATGCCGTTTCGCTTCAAGACCAGGACGCTGCTAATCGCCGCCAGTCTGGCGGGGGCTCTGGGTCTCGCCTGGGTC
GCCTTTCCAAAGCCGCCGAC

Product: N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 585

Protein sequence:

>586_residues
MSAMRFATALFVSVWLGVPQAAAALRLVYPPDGHRTESASIYFIGTAPGAGSLQVNGQKVARHPAGHFAWTVPLQSGINT
FRWTFRGTHGASETVERQVIRQSPNPPVPGDRLFLEARLPRGEQRVLPFEPVCFEARATPGGQLQARVGEQSIALAEAAP
FREPGDAAAVLSGGAAGRSLVGFYRGCLAAAESWRDVEPRLDFRRRGQVLSSPVPATITSLDPRQLTVIEVTAAEAIVRA
GPGAEFARLSPLTRGVRSRVTAVSGDWLRLQGEGWIARADGMALPVGTALPTSAVGALRTRVTTAGSELIVPLEMRLPAS
VRQEEHRLIVTLWGAQARTDLIRFDAPDPLIRSVQWETVSPEGVRFYIDLRERRQWGYQLRYEDNALVVALRKGPRVGRG
LAGARVMIDPGHGGAQTGSIGPSGIPEKTVNLAIALRLGEQLRRAGAEVLFTRTADVDVPLAERSRMLEAKQPTVFLSLH
HNALPDAGDPLRQYGTSVYWYHMQSRELAEVLHRQLLRDLGRPDYGLYWDSLAVIRPTAAPAVLLELGFMTHPDEYTLIT
APAYQERIARALTRGLERWLHAERPE

Sequences:

>Translated_586_residues
MSAMRFATALFVSVWLGVPQAAAALRLVYPPDGHRTESASIYFIGTAPGAGSLQVNGQKVARHPAGHFAWTVPLQSGINT
FRWTFRGTHGASETVERQVIRQSPNPPVPGDRLFLEARLPRGEQRVLPFEPVCFEARATPGGQLQARVGEQSIALAEAAP
FREPGDAAAVLSGGAAGRSLVGFYRGCLAAAESWRDVEPRLDFRRRGQVLSSPVPATITSLDPRQLTVIEVTAAEAIVRA
GPGAEFARLSPLTRGVRSRVTAVSGDWLRLQGEGWIARADGMALPVGTALPTSAVGALRTRVTTAGSELIVPLEMRLPAS
VRQEEHRLIVTLWGAQARTDLIRFDAPDPLIRSVQWETVSPEGVRFYIDLRERRQWGYQLRYEDNALVVALRKGPRVGRG
LAGARVMIDPGHGGAQTGSIGPSGIPEKTVNLAIALRLGEQLRRAGAEVLFTRTADVDVPLAERSRMLEAKQPTVFLSLH
HNALPDAGDPLRQYGTSVYWYHMQSRELAEVLHRQLLRDLGRPDYGLYWDSLAVIRPTAAPAVLLELGFMTHPDEYTLIT
APAYQERIARALTRGLERWLHAERPE
>Mature_585_residues
SAMRFATALFVSVWLGVPQAAAALRLVYPPDGHRTESASIYFIGTAPGAGSLQVNGQKVARHPAGHFAWTVPLQSGINTF
RWTFRGTHGASETVERQVIRQSPNPPVPGDRLFLEARLPRGEQRVLPFEPVCFEARATPGGQLQARVGEQSIALAEAAPF
REPGDAAAVLSGGAAGRSLVGFYRGCLAAAESWRDVEPRLDFRRRGQVLSSPVPATITSLDPRQLTVIEVTAAEAIVRAG
PGAEFARLSPLTRGVRSRVTAVSGDWLRLQGEGWIARADGMALPVGTALPTSAVGALRTRVTTAGSELIVPLEMRLPASV
RQEEHRLIVTLWGAQARTDLIRFDAPDPLIRSVQWETVSPEGVRFYIDLRERRQWGYQLRYEDNALVVALRKGPRVGRGL
AGARVMIDPGHGGAQTGSIGPSGIPEKTVNLAIALRLGEQLRRAGAEVLFTRTADVDVPLAERSRMLEAKQPTVFLSLHH
NALPDAGDPLRQYGTSVYWYHMQSRELAEVLHRQLLRDLGRPDYGLYWDSLAVIRPTAAPAVLLELGFMTHPDEYTLITA
PAYQERIARALTRGLERWLHAERPE

Specific function: Probably involved in cell-wall metabolism [H]

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002508
- InterPro:   IPR017293
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01520 Amidase_3; PF08239 SH3_3 [H]

EC number: =3.5.1.28 [H]

Molecular weight: Translated: 64135; Mature: 64004

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAMRFATALFVSVWLGVPQAAAALRLVYPPDGHRTESASIYFIGTAPGAGSLQVNGQKV
CCHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCEEEEEEECCCCCCEEEECCHHH
ARHPAGHFAWTVPLQSGINTFRWTFRGTHGASETVERQVIRQSPNPPVPGDRLFLEARLP
HCCCCCCEEEEEEHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECC
RGEQRVLPFEPVCFEARATPGGQLQARVGEQSIALAEAAPFREPGDAAAVLSGGAAGRSL
CCCCCCCCCCCCEEEECCCCCCCEEEECCCCCEEHHHCCCCCCCCCCEEEEECCCCCHHH
VGFYRGCLAAAESWRDVEPRLDFRRRGQVLSSPVPATITSLDPRQLTVIEVTAAEAIVRA
HHHHHHHHHHHHHCCCCCCCCCHHHCCCHHCCCCCCEEECCCCCEEEEEEEEHHHHHHHC
GPGAEFARLSPLTRGVRSRVTAVSGDWLRLQGEGWIARADGMALPVGTALPTSAVGALRT
CCCCCHHHHHHHHHHHHHHHEEECCCEEEEECCCEEEECCCEEEECCCCCCHHHHHHHHH
RVTTAGSELIVPLEMRLPASVRQEEHRLIVTLWGAQARTDLIRFDAPDPLIRSVQWETVS
HEEECCCCEEEEEEECCCHHHCCCCCEEEEEEECCCCCCCEEEECCCCHHHHCEEEEECC
PEGVRFYIDLRERRQWGYQLRYEDNALVVALRKGPRVGRGLAGARVMIDPGHGGAQTGSI
CCCEEEEEEEHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCC
GPSGIPEKTVNLAIALRLGEQLRRAGAEVLFTRTADVDVPLAERSRMLEAKQPTVFLSLH
CCCCCCCHHHEEEEEEHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEE
HNALPDAGDPLRQYGTSVYWYHMQSRELAEVLHRQLLRDLGRPDYGLYWDSLAVIRPTAA
CCCCCCCCCHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEECCEEEECCCCC
PAVLLELGFMTHPDEYTLITAPAYQERIARALTRGLERWLHAERPE
HHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SAMRFATALFVSVWLGVPQAAAALRLVYPPDGHRTESASIYFIGTAPGAGSLQVNGQKV
CHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCEEEEEEECCCCCCEEEECCHHH
ARHPAGHFAWTVPLQSGINTFRWTFRGTHGASETVERQVIRQSPNPPVPGDRLFLEARLP
HCCCCCCEEEEEEHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECC
RGEQRVLPFEPVCFEARATPGGQLQARVGEQSIALAEAAPFREPGDAAAVLSGGAAGRSL
CCCCCCCCCCCCEEEECCCCCCCEEEECCCCCEEHHHCCCCCCCCCCEEEEECCCCCHHH
VGFYRGCLAAAESWRDVEPRLDFRRRGQVLSSPVPATITSLDPRQLTVIEVTAAEAIVRA
HHHHHHHHHHHHHCCCCCCCCCHHHCCCHHCCCCCCEEECCCCCEEEEEEEEHHHHHHHC
GPGAEFARLSPLTRGVRSRVTAVSGDWLRLQGEGWIARADGMALPVGTALPTSAVGALRT
CCCCCHHHHHHHHHHHHHHHEEECCCEEEEECCCEEEECCCEEEECCCCCCHHHHHHHHH
RVTTAGSELIVPLEMRLPASVRQEEHRLIVTLWGAQARTDLIRFDAPDPLIRSVQWETVS
HEEECCCCEEEEEEECCCHHHCCCCCEEEEEEECCCCCCCEEEECCCCHHHHCEEEEECC
PEGVRFYIDLRERRQWGYQLRYEDNALVVALRKGPRVGRGLAGARVMIDPGHGGAQTGSI
CCCEEEEEEEHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCC
GPSGIPEKTVNLAIALRLGEQLRRAGAEVLFTRTADVDVPLAERSRMLEAKQPTVFLSLH
CCCCCCCHHHEEEEEEHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEE
HNALPDAGDPLRQYGTSVYWYHMQSRELAEVLHRQLLRDLGRPDYGLYWDSLAVIRPTAA
CCCCCCCCCHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEECCEEEECCCCC
PAVLLELGFMTHPDEYTLITAPAYQERIARALTRGLERWLHAERPE
HHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]