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The map label for this gene is yhcZ [H]

Identifier: 37519948

GI number: 37519948

Start: 396342

End: 396980

Strand: Reverse

Name: yhcZ [H]

Synonym: gll0379

Alternate gene names: 37519948

Gene position: 396980-396342 (Counterclockwise)

Preceding gene: 37519949

Following gene: 37519947

Centisome position: 8.52

GC content: 64.01

Gene sequence:

>639_bases
ATGACTAGAAAAACCCGGGTACTGCTCATCGAGGACGACCCGGTGTTCCGGGTGGGCCTGCGGGTCATTTTTGAGCAAAG
CGGGGTAGCCGAACTGGTTGGGGAGGCTGGTGAAGGCGAAATCGCCCTGGCGCTCTGTTTGCAAATGCAGCCGGATGTGG
TGCTGCTCGATCTCGGTCTACCGGGGGCGATGGGGGCGCGGGAGATCGTGACGAGCCTCAAGGAGCGCCACCCGGGGATC
AAGATTCTGGCGCTCACCTCCCACGCCGACGGACCGTCGGTGCAGCAATTGTTGCAGGCGGGCATCGACGGGTACTGCGT
CAAGGGCATCGAACCGGAGCAACTGCTGCAGGCGATCCTCCAGGTGCGTTCAGGCCACGTCTGGTGGGACGGCCGGGTGG
CCGCTTATCTGCGCTCAGGGCCTGAGCCTGAGCGGCGCGACTACCAGCTCACTCCCCGCGAGCGGCAGGTGCTGGGGTTA
CTTGCCAACGGCCTGAGCAACCAGCAAATCGGCCGGCAGTTGTTTATTTCGGTGGGTACGGTCCAGGTACATGTGCACAC
GATCTTGCGCAAGCTGGGAGCGCGCGACCGCACCCAGGCAGCCATCCTGGCCCTTCAGGAGGGGTTGATGGACCGGTAG

Upstream 100 bases:

>100_bases
CGGCAGATCGTCGAAGCCCACAGCGGGCGCATCTGGGCGGTCAACAACCGCGACGAAGGCTGCACTTTTGTGATGGCGTT
ACCTAAGACCGACCAAGGCC

Downstream 100 bases:

>100_bases
ATCGGTGGATGGCGGTGTTATACTCGCCGCGTTCCGGGAGGCTCGGTACGGCTTATGCACCTGCTTTCCATCGTGGGCAT
CGGAGCGGACGGTCCCCGCG

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTRKTRVLLIEDDPVFRVGLRVIFEQSGVAELVGEAGEGEIALALCLQMQPDVVLLDLGLPGAMGAREIVTSLKERHPGI
KILALTSHADGPSVQQLLQAGIDGYCVKGIEPEQLLQAILQVRSGHVWWDGRVAAYLRSGPEPERRDYQLTPRERQVLGL
LANGLSNQQIGRQLFISVGTVQVHVHTILRKLGARDRTQAAILALQEGLMDR

Sequences:

>Translated_212_residues
MTRKTRVLLIEDDPVFRVGLRVIFEQSGVAELVGEAGEGEIALALCLQMQPDVVLLDLGLPGAMGAREIVTSLKERHPGI
KILALTSHADGPSVQQLLQAGIDGYCVKGIEPEQLLQAILQVRSGHVWWDGRVAAYLRSGPEPERRDYQLTPRERQVLGL
LANGLSNQQIGRQLFISVGTVQVHVHTILRKLGARDRTQAAILALQEGLMDR
>Mature_211_residues
TRKTRVLLIEDDPVFRVGLRVIFEQSGVAELVGEAGEGEIALALCLQMQPDVVLLDLGLPGAMGAREIVTSLKERHPGIK
ILALTSHADGPSVQQLLQAGIDGYCVKGIEPEQLLQAILQVRSGHVWWDGRVAAYLRSGPEPERRDYQLTPRERQVLGLL
ANGLSNQQIGRQLFISVGTVQVHVHTILRKLGARDRTQAAILALQEGLMDR

Specific function: Member of the two-component regulatory system yhcY/yhcZ [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=206, Percent_Identity=39.3203883495146, Blast_Score=120, Evalue=7e-29,
Organism=Escherichia coli, GI1788222, Length=210, Percent_Identity=31.9047619047619, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI1787473, Length=206, Percent_Identity=37.378640776699, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786747, Length=194, Percent_Identity=25.2577319587629, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1790102, Length=195, Percent_Identity=30.7692307692308, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1788712, Length=190, Percent_Identity=22.6315789473684, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789937, Length=129, Percent_Identity=29.4573643410853, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1787277, Length=156, Percent_Identity=28.2051282051282, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788546, Length=193, Percent_Identity=24.3523316062176, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23261; Mature: 23130

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRKTRVLLIEDDPVFRVGLRVIFEQSGVAELVGEAGEGEIALALCLQMQPDVVLLDLGL
CCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEEEECCCCEEEEECCC
PGAMGAREIVTSLKERHPGIKILALTSHADGPSVQQLLQAGIDGYCVKGIEPEQLLQAIL
CCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHH
QVRSGHVWWDGRVAAYLRSGPEPERRDYQLTPRERQVLGLLANGLSNQQIGRQLFISVGT
HHHCCCEEECCHHEEEHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHEEECCH
VQVHVHTILRKLGARDRTQAAILALQEGLMDR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRKTRVLLIEDDPVFRVGLRVIFEQSGVAELVGEAGEGEIALALCLQMQPDVVLLDLGL
CCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEEEECCCCEEEEECCC
PGAMGAREIVTSLKERHPGIKILALTSHADGPSVQQLLQAGIDGYCVKGIEPEQLLQAIL
CCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHH
QVRSGHVWWDGRVAAYLRSGPEPERRDYQLTPRERQVLGLLANGLSNQQIGRQLFISVGT
HHHCCCEEECCHHEEEHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHEEECCH
VQVHVHTILRKLGARDRTQAAILALQEGLMDR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]