Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
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Accession | NC_005085 |
Length | 4,751,080 |
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The map label for this gene is 34498657
Identifier: 34498657
GI number: 34498657
Start: 3485044
End: 3485619
Strand: Direct
Name: 34498657
Synonym: CV_3202
Alternate gene names: NA
Gene position: 3485044-3485619 (Clockwise)
Preceding gene: 34498656
Following gene: 34498659
Centisome position: 73.35
GC content: 67.71
Gene sequence:
>576_bases ATGATCCGCACCGCGCTGCTGTGCTGCGCGTTCGCCTTGCTCACCGGCTGCGCCACCATGGCCGACCGCCTCAGGGGCAC GCTGACGCCGCCGCCGGGCCAGGCCTACGCCATCGTGTCGCTGACCGGCAAGGCTTTCGACCCCGACCGCGCCACCATAG GCCTGTCCGTCAGCGACGCCGGCGGACGGGTGGTGTCCCAGGATGTCGCCAGCCTGATCACCGATACCGTGTTCGGCGAG GAAGGCATGTCTCCGGCGGAGGGCAAGCTGGTGCTGATGACCTTGCCGCCGGGCGACTACCGCGTCTCGGGCGCATGGGC ACACTGGATGGAGGACGGCGTTTTCGGCGTCGACCTGAGGATGAGGCAGTTTCCGCTGAACGCGCCCTTCCACCTGGATG CCGGCGAAACGGCATACCTGGGCCAGGTGCAGGTGGAAATGTCCTTCCTGCCGGAAGTGAAGCTGTCAGACGAGCGGCGG CGGGATTTCGGCCACATGCGCCGGGTATGGAAGATCAAGGATCTGAGCCAGGTCAGAATCCGGCCGCTGGCGGCCGCCGG CCCGACCCATCCCTGA
Upstream 100 bases:
>100_bases CAGGCTGCAGGACGCAGCCGGCAAACTGTACGCCCACGCCACCACCACCTGCATGATCTTCGACGCCCCGGCCGGCTAGC TCGTTCAAAAGGAAAAACAC
Downstream 100 bases:
>100_bases AGCGGTTCAGGGCTTGTACCAGAGCTTGTACAGATAGGCGGGCTTGACCGCCGCCGCCGAAGCCGCCACCGGCTCCAGCA CCTGGTAGGCCGCCTGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MIRTALLCCAFALLTGCATMADRLRGTLTPPPGQAYAIVSLTGKAFDPDRATIGLSVSDAGGRVVSQDVASLITDTVFGE EGMSPAEGKLVLMTLPPGDYRVSGAWAHWMEDGVFGVDLRMRQFPLNAPFHLDAGETAYLGQVQVEMSFLPEVKLSDERR RDFGHMRRVWKIKDLSQVRIRPLAAAGPTHP
Sequences:
>Translated_191_residues MIRTALLCCAFALLTGCATMADRLRGTLTPPPGQAYAIVSLTGKAFDPDRATIGLSVSDAGGRVVSQDVASLITDTVFGE EGMSPAEGKLVLMTLPPGDYRVSGAWAHWMEDGVFGVDLRMRQFPLNAPFHLDAGETAYLGQVQVEMSFLPEVKLSDERR RDFGHMRRVWKIKDLSQVRIRPLAAAGPTHP >Mature_191_residues MIRTALLCCAFALLTGCATMADRLRGTLTPPPGQAYAIVSLTGKAFDPDRATIGLSVSDAGGRVVSQDVASLITDTVFGE EGMSPAEGKLVLMTLPPGDYRVSGAWAHWMEDGVFGVDLRMRQFPLNAPFHLDAGETAYLGQVQVEMSFLPEVKLSDERR RDFGHMRRVWKIKDLSQVRIRPLAAAGPTHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20771; Mature: 20771
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTALLCCAFALLTGCATMADRLRGTLTPPPGQAYAIVSLTGKAFDPDRATIGLSVSDA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCC GGRVVSQDVASLITDTVFGEEGMSPAEGKLVLMTLPPGDYRVSGAWAHWMEDGVFGVDLR CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEECCHHHHHHHCCEEEEEEE MRQFPLNAPFHLDAGETAYLGQVQVEMSFLPEVKLSDERRRDFGHMRRVWKIKDLSQVRI EEECCCCCCEEECCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHEE RPLAAAGPTHP EEEECCCCCCC >Mature Secondary Structure MIRTALLCCAFALLTGCATMADRLRGTLTPPPGQAYAIVSLTGKAFDPDRATIGLSVSDA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCC GGRVVSQDVASLITDTVFGEEGMSPAEGKLVLMTLPPGDYRVSGAWAHWMEDGVFGVDLR CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEECCHHHHHHHCCEEEEEEE MRQFPLNAPFHLDAGETAYLGQVQVEMSFLPEVKLSDERRRDFGHMRRVWKIKDLSQVRI EEECCCCCCEEECCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHEE RPLAAAGPTHP EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA