Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
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Accession | NC_005085 |
Length | 4,751,080 |
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The map label for this gene is 34498656
Identifier: 34498656
GI number: 34498656
Start: 3484510
End: 3485022
Strand: Direct
Name: 34498656
Synonym: CV_3201
Alternate gene names: NA
Gene position: 3484510-3485022 (Clockwise)
Preceding gene: 34498655
Following gene: 34498657
Centisome position: 73.34
GC content: 66.47
Gene sequence:
>513_bases ATGACCAGCCCAGACACCGCCGCACGCAGCCTTACCGTCCAGTGGGACGATCCGATGATAGGCGCCCGCGCCGCCCAAAC GCTCAGCGGCCTGGAATACCTGCGGGCGATGGAGGCCGGCGACATCCCGCCGCCGCCGGTGATGAAGCTGCTCGGCTTCG ACTTCGTTCGCGCAACGGAAGGCGAAGTCGAATTCGCCTTCGTCCCGCACGAGTCCCATTTCAATCCGATCGGCAGCGTC CACGGCGGCGTGATCAGCACGCTGCTGGACTCCGCGATGGGTTGCAGCGTCCATTCGCTGCTGCCGCGCGGCAAGGGCTA CACTACGCTGGAGTTGAAAGTGAATTTCGTGCGCGCCGTTCTGCCACGCCATGGCAAGCTGCTGTGCCGCGGCCAGGTCA TCCATTCCGGCGGGCGCATGGCCACCGCGGAAGCCAGGCTGCAGGACGCAGCCGGCAAACTGTACGCCCACGCCACCACC ACCTGCATGATCTTCGACGCCCCGGCCGGCTAG
Upstream 100 bases:
>100_bases TCGCGCCGCATCTGCAAAGCGCCGCGCCCGAATGTCATAGCCGTTGACGATTCCGCCTTCCCGATGGCAAGTTTGAGAAC TTGCCTCCAGGGGAACGCCA
Downstream 100 bases:
>100_bases CTCGTTCAAAAGGAAAAACACATGATCCGCACCGCGCTGCTGTGCTGCGCGTTCGCCTTGCTCACCGGCTGCGCCACCAT GGCCGACCGCCTCAGGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Thioesterase Family Protein; Thioesterase; Phenylacetic Acid Degradation-Like Protein; Aromatic Compounds Catabolic Protein; PaaI Thioesterase; Aromatic Compounds Degradation Protein PaaI; Domain 1 Protein; Protein Possibly Involved In Aromatic Compounds Catabolism; Protein Involved In Aromatic Compounds Catabolism; Orf_Bo
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MTSPDTAARSLTVQWDDPMIGARAAQTLSGLEYLRAMEAGDIPPPPVMKLLGFDFVRATEGEVEFAFVPHESHFNPIGSV HGGVISTLLDSAMGCSVHSLLPRGKGYTTLELKVNFVRAVLPRHGKLLCRGQVIHSGGRMATAEARLQDAAGKLYAHATT TCMIFDAPAG
Sequences:
>Translated_170_residues MTSPDTAARSLTVQWDDPMIGARAAQTLSGLEYLRAMEAGDIPPPPVMKLLGFDFVRATEGEVEFAFVPHESHFNPIGSV HGGVISTLLDSAMGCSVHSLLPRGKGYTTLELKVNFVRAVLPRHGKLLCRGQVIHSGGRMATAEARLQDAAGKLYAHATT TCMIFDAPAG >Mature_169_residues TSPDTAARSLTVQWDDPMIGARAAQTLSGLEYLRAMEAGDIPPPPVMKLLGFDFVRATEGEVEFAFVPHESHFNPIGSVH GGVISTLLDSAMGCSVHSLLPRGKGYTTLELKVNFVRAVLPRHGKLLCRGQVIHSGGRMATAEARLQDAAGKLYAHATTT CMIFDAPAG
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18145; Mature: 18014
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPDTAARSLTVQWDDPMIGARAAQTLSGLEYLRAMEAGDIPPPPVMKLLGFDFVRATE CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHEECCC GEVEFAFVPHESHFNPIGSVHGGVISTLLDSAMGCSVHSLLPRGKGYTTLELKVNFVRAV CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEHHHHHHH LPRHGKLLCRGQVIHSGGRMATAEARLQDAAGKLYAHATTTCMIFDAPAG HCCCCCEEEECEEEECCCCEEHHHHHHHHHHCCEEEEEEEEEEEEECCCC >Mature Secondary Structure TSPDTAARSLTVQWDDPMIGARAAQTLSGLEYLRAMEAGDIPPPPVMKLLGFDFVRATE CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHEECCC GEVEFAFVPHESHFNPIGSVHGGVISTLLDSAMGCSVHSLLPRGKGYTTLELKVNFVRAV CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEHHHHHHH LPRHGKLLCRGQVIHSGGRMATAEARLQDAAGKLYAHATTTCMIFDAPAG HCCCCCEEEECEEEECCCCEEHHHHHHHHHHCCEEEEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA