Click here to switch to the map view.

The map label for this gene is ysgA [H]

Identifier: 34498659

GI number: 34498659

Start: 3486976

End: 3487821

Strand: Direct

Name: ysgA [H]

Synonym: CV_3204

Alternate gene names: 34498659

Gene position: 3486976-3487821 (Clockwise)

Preceding gene: 34498657

Following gene: 34498661

Centisome position: 73.39

GC content: 69.15

Gene sequence:

>846_bases
ATGAGCGACAGCAACGCATCCCTTCCCCGCCGCGCTTTCCTGGCCGGAGCAGGCAGCCTGGGCTTCGCCCTTGCGGTCCA
GCCCATCGCCGCCAGCACCATCGTCACCGACAACCGGCAACTGCAAACCGGCCAGCCGGACATCGACACCGGCCATGGAA
CGATGCCGGGCTACTACGCCCGTCCCGCCCAGGGCGATGGCCCCTGGCCGCTGGTGATCGTGATCCAGGAAATCTTCGGC
GTGCACGAACACATCCAGGACCTGTGCCGCCGCCTGGCGAAGCAGGGCTACCTGGCGGTGGCGCCGGAACTGTATTTCCG
CCACGGCAAGCCGGCGCAAGCGCCGGACATAGACAGCCTGCTGCGGGATATCGTCTCCAAGGTGCCGGACAGCGAGGTGC
TGAGCGATCTGGACGCGACCTGGCGCTGGGCCGGCGCGCACGGCGCCGATCTGGACCGCGCCGCCGTCACCGGCTTCTGC
TGGGGCGGACGCCAGGCCTGGCTCTACGCCGCGCACAATCCACGGCTGAAGGCCGCCGCCGCCTGGTATGGCAAGCTGGA
AGGCGCGGCGAACGCCAATATGCCGCGCCAGCCGCTGGACATCGCCGGCGAGTTGAAGGTGCCGGTGCTGGGGTTGTATG
GCGGGCAGGACCAGAGCATCCCGCTCGCCGGGGTGGATAAAATGAAGGCCGCGCTGAGCGCCGCCGGCAAGGGAAGCGAA
ATCGTCGTCTATCCGGACGCTGGCCACGGCTTCAACGCCGACTACCGTCCCAGCTATCATCCGCGCGACGCCGGCGACGC
CTGGCGCAGGATGCTGGACTGGTTCGCCCGCCACGGCGCGCGCTGA

Upstream 100 bases:

>100_bases
TGTTAGTTCTAGCTAGAGCAGTTGCCGGGATTTTATTTAAATTTTATCGAAAACGCGCGCGGATGCCAGCCCGCGCATCC
GCTACAGGAGCCGCCCCGAC

Downstream 100 bases:

>100_bases
GCGGCCCGGCTAGGTGCCGCCGACCACATTGCCCAGCTCCAGCCGGGTGCGCACCACCTGGTTGAACAGCTGCAGCCAGT
AGGGGTCGAACTGCCGCTCC

Product: carboxymethylenebutenolidase

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH [H]

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSDSNASLPRRAFLAGAGSLGFALAVQPIAASTIVTDNRQLQTGQPDIDTGHGTMPGYYARPAQGDGPWPLVIVIQEIFG
VHEHIQDLCRRLAKQGYLAVAPELYFRHGKPAQAPDIDSLLRDIVSKVPDSEVLSDLDATWRWAGAHGADLDRAAVTGFC
WGGRQAWLYAAHNPRLKAAAAWYGKLEGAANANMPRQPLDIAGELKVPVLGLYGGQDQSIPLAGVDKMKAALSAAGKGSE
IVVYPDAGHGFNADYRPSYHPRDAGDAWRRMLDWFARHGAR

Sequences:

>Translated_281_residues
MSDSNASLPRRAFLAGAGSLGFALAVQPIAASTIVTDNRQLQTGQPDIDTGHGTMPGYYARPAQGDGPWPLVIVIQEIFG
VHEHIQDLCRRLAKQGYLAVAPELYFRHGKPAQAPDIDSLLRDIVSKVPDSEVLSDLDATWRWAGAHGADLDRAAVTGFC
WGGRQAWLYAAHNPRLKAAAAWYGKLEGAANANMPRQPLDIAGELKVPVLGLYGGQDQSIPLAGVDKMKAALSAAGKGSE
IVVYPDAGHGFNADYRPSYHPRDAGDAWRRMLDWFARHGAR
>Mature_280_residues
SDSNASLPRRAFLAGAGSLGFALAVQPIAASTIVTDNRQLQTGQPDIDTGHGTMPGYYARPAQGDGPWPLVIVIQEIFGV
HEHIQDLCRRLAKQGYLAVAPELYFRHGKPAQAPDIDSLLRDIVSKVPDSEVLSDLDATWRWAGAHGADLDRAAVTGFCW
GGRQAWLYAAHNPRLKAAAAWYGKLEGAANANMPRQPLDIAGELKVPVLGLYGGQDQSIPLAGVDKMKAALSAAGKGSEI
VVYPDAGHGFNADYRPSYHPRDAGDAWRRMLDWFARHGAR

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI48994982, Length=268, Percent_Identity=57.4626865671642, Blast_Score=328, Evalue=3e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: =3.1.1.45 [H]

Molecular weight: Translated: 30300; Mature: 30169

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSNASLPRRAFLAGAGSLGFALAVQPIAASTIVTDNRQLQTGQPDIDTGHGTMPGYYA
CCCCCCCCCHHHHHHCCCCCCHHEEEHHHHHEEEEECCCEEECCCCCCCCCCCCCCCCCC
RPAQGDGPWPLVIVIQEIFGVHEHIQDLCRRLAKQGYLAVAPELYFRHGKPAQAPDIDSL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHCCCCCCCCCCHHHH
LRDIVSKVPDSEVLSDLDATWRWAGAHGADLDRAAVTGFCWGGRQAWLYAAHNPRLKAAA
HHHHHHHCCCHHHHHHHHHHEEECCCCCCCCCHHHHEEEEECCCEEEEEECCCCCCHHHH
AWYGKLEGAANANMPRQPLDIAGELKVPVLGLYGGQDQSIPLAGVDKMKAALSAAGKGSE
HHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCE
IVVYPDAGHGFNADYRPSYHPRDAGDAWRRMLDWFARHGAR
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDSNASLPRRAFLAGAGSLGFALAVQPIAASTIVTDNRQLQTGQPDIDTGHGTMPGYYA
CCCCCCCCHHHHHHCCCCCCHHEEEHHHHHEEEEECCCEEECCCCCCCCCCCCCCCCCC
RPAQGDGPWPLVIVIQEIFGVHEHIQDLCRRLAKQGYLAVAPELYFRHGKPAQAPDIDSL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHCCCCCCCCCCHHHH
LRDIVSKVPDSEVLSDLDATWRWAGAHGADLDRAAVTGFCWGGRQAWLYAAHNPRLKAAA
HHHHHHHCCCHHHHHHHHHHEEECCCCCCCCCHHHHEEEEECCCEEEEEECCCCCCHHHH
AWYGKLEGAANANMPRQPLDIAGELKVPVLGLYGGQDQSIPLAGVDKMKAALSAAGKGSE
HHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCE
IVVYPDAGHGFNADYRPSYHPRDAGDAWRRMLDWFARHGAR
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]