Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
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Accession | NC_005085 |
Length | 4,751,080 |
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The map label for this gene is yheT [H]
Identifier: 34498655
GI number: 34498655
Start: 3483482
End: 3484456
Strand: Direct
Name: yheT [H]
Synonym: CV_3200
Alternate gene names: 34498655
Gene position: 3483482-3484456 (Clockwise)
Preceding gene: 34498654
Following gene: 34498656
Centisome position: 73.32
GC content: 72.31
Gene sequence:
>975_bases ATGAGCTACCGCGCGCCGCGCTGGCTGCGGGGCGGCCACGCGCAAACCATCTGGCCGGCGCTGGCGGTCAAGCAGGACGC GCCGTCCTACCGCCGCGAGCTGTGGGATACCCCGGACGGCGCGCGCATCGCGCTGGACTTCGTCGACGGCCAGCCCGGCG CGCCGCTGGTGGTGCTGTTCCACGGCCTGGAAGGCAGCAGCGCCAGCCATTACGCCAAGGCGCTGATGCAGGCGGTGGCC GCGCGCGGCTGGCACGGCGCGGTGTCGCACTTCCGCGGCTGCGGCGGCGTGGACAACCCGCTGCCGCGCGCCTACCACGC CGGCGACGCCGCCGAAGTGCGCTGGATCCTGCAGCGGCTGTCCGGCCGCTTCGCCGCCATCGCCGCCGTCGGCGTGTCGC TGGGCGGCAGCATGCTGCTCAACTACCTGGCGGACGACGGCCAAGCCGCGCTGCCGCTGGCCGCCGCCGCGGTGTCCGCG CCGCTGGACCTGGTGGCCGCCAGCACCCGGCTGGACCGCGGCCTGGGCAAGCTCCTCTACACCCGGATGTTCATGGACAC GCTGAAACCGAAGGCGATGGCGTCGCTGCAGCGCCATCCGGGCCTGTTCGACGGCGCCAGGCTGAGCCGCGCGCGCACCT TCATCGAGTTCGACGACCTGGTCACCGCCCCCATCCATGGCTTCGGCACCGCGCTCAATTACTGGACCCAAGCCAGCAGC AAGCCCCGGCTCGGCCAGATCGCCCGCCCGACGCTGGTGCTGAACGCCCGCAACGATCCCTTCCTGCCGGAGAGCGCGCT GCCCGACGCCAGCCAGGTGTCGCCTGCCGTGACGCTGGACTTCCCCAGCGACGGCGGACATGTGGGCTTCGCCACCGGCC CTTTCCCCGGACGGATAGACTGGCTGCCACAACGGCTGCTGGCGTTCATCGCGCCGCATCTGCAAAGCGCCGCGCCCGAA TGTCATAGCCGTTGA
Upstream 100 bases:
>100_bases CCGTGCCCTACTGCCTGGACCTAATCGGCGCGCCCTACATCGAAACCGATGAAGCGGTGGTCAAGGCCTTCCGGCCCAAG TCCGCCGTCAAGCCGGCGCC
Downstream 100 bases:
>100_bases CGATTCCGCCTTCCCGATGGCAAGTTTGAGAACTTGCCTCCAGGGGAACGCCAATGACCAGCCCAGACACCGCCGCACGC AGCCTTACCGTCCAGTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSYRAPRWLRGGHAQTIWPALAVKQDAPSYRRELWDTPDGARIALDFVDGQPGAPLVVLFHGLEGSSASHYAKALMQAVA ARGWHGAVSHFRGCGGVDNPLPRAYHAGDAAEVRWILQRLSGRFAAIAAVGVSLGGSMLLNYLADDGQAALPLAAAAVSA PLDLVAASTRLDRGLGKLLYTRMFMDTLKPKAMASLQRHPGLFDGARLSRARTFIEFDDLVTAPIHGFGTALNYWTQASS KPRLGQIARPTLVLNARNDPFLPESALPDASQVSPAVTLDFPSDGGHVGFATGPFPGRIDWLPQRLLAFIAPHLQSAAPE CHSR
Sequences:
>Translated_324_residues MSYRAPRWLRGGHAQTIWPALAVKQDAPSYRRELWDTPDGARIALDFVDGQPGAPLVVLFHGLEGSSASHYAKALMQAVA ARGWHGAVSHFRGCGGVDNPLPRAYHAGDAAEVRWILQRLSGRFAAIAAVGVSLGGSMLLNYLADDGQAALPLAAAAVSA PLDLVAASTRLDRGLGKLLYTRMFMDTLKPKAMASLQRHPGLFDGARLSRARTFIEFDDLVTAPIHGFGTALNYWTQASS KPRLGQIARPTLVLNARNDPFLPESALPDASQVSPAVTLDFPSDGGHVGFATGPFPGRIDWLPQRLLAFIAPHLQSAAPE CHSR >Mature_323_residues SYRAPRWLRGGHAQTIWPALAVKQDAPSYRRELWDTPDGARIALDFVDGQPGAPLVVLFHGLEGSSASHYAKALMQAVAA RGWHGAVSHFRGCGGVDNPLPRAYHAGDAAEVRWILQRLSGRFAAIAAVGVSLGGSMLLNYLADDGQAALPLAAAAVSAP LDLVAASTRLDRGLGKLLYTRMFMDTLKPKAMASLQRHPGLFDGARLSRARTFIEFDDLVTAPIHGFGTALNYWTQASSK PRLGQIARPTLVLNARNDPFLPESALPDASQVSPAVTLDFPSDGGHVGFATGPFPGRIDWLPQRLLAFIAPHLQSAAPEC HSR
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=324, Percent_Identity=29.0123456790123, Blast_Score=145, Evalue=4e-35, Organism=Homo sapiens, GI194578891, Length=312, Percent_Identity=31.4102564102564, Blast_Score=138, Evalue=7e-33, Organism=Homo sapiens, GI23397659, Length=331, Percent_Identity=22.9607250755287, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI23397661, Length=331, Percent_Identity=22.9607250755287, Blast_Score=86, Evalue=6e-17, Organism=Escherichia coli, GI1789752, Length=327, Percent_Identity=38.2262996941896, Blast_Score=204, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17566110, Length=311, Percent_Identity=29.5819935691318, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71985405, Length=305, Percent_Identity=26.2295081967213, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI71985413, Length=201, Percent_Identity=27.363184079602, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323866, Length=273, Percent_Identity=27.8388278388278, Blast_Score=110, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6325162, Length=264, Percent_Identity=31.0606060606061, Blast_Score=101, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6319655, Length=261, Percent_Identity=29.1187739463602, Blast_Score=98, Evalue=1e-21, Organism=Drosophila melanogaster, GI24652003, Length=317, Percent_Identity=29.9684542586751, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI281398151, Length=317, Percent_Identity=29.9684542586751, Blast_Score=135, Evalue=5e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 34737; Mature: 34606
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRAPRWLRGGHAQTIWPALAVKQDAPSYRRELWDTPDGARIALDFVDGQPGAPLVVLF CCCCCCCHHCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEE HGLEGSSASHYAKALMQAVAARGWHGAVSHFRGCGGVDNPLPRAYHAGDAAEVRWILQRL ECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHH SGRFAAIAAVGVSLGGSMLLNYLADDGQAALPLAAAAVSAPLDLVAASTRLDRGLGKLLY CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH TRMFMDTLKPKAMASLQRHPGLFDGARLSRARTFIEFDDLVTAPIHGFGTALNYWTQASS HHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC KPRLGQIARPTLVLNARNDPFLPESALPDASQVSPAVTLDFPSDGGHVGFATGPFPGRID CCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHCCCEEEEECCCCCCEECEECCCCCCCHH WLPQRLLAFIAPHLQSAAPECHSR HHHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure SYRAPRWLRGGHAQTIWPALAVKQDAPSYRRELWDTPDGARIALDFVDGQPGAPLVVLF CCCCCCHHCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEE HGLEGSSASHYAKALMQAVAARGWHGAVSHFRGCGGVDNPLPRAYHAGDAAEVRWILQRL ECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHH SGRFAAIAAVGVSLGGSMLLNYLADDGQAALPLAAAAVSAPLDLVAASTRLDRGLGKLLY CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH TRMFMDTLKPKAMASLQRHPGLFDGARLSRARTFIEFDDLVTAPIHGFGTALNYWTQASS HHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC KPRLGQIARPTLVLNARNDPFLPESALPDASQVSPAVTLDFPSDGGHVGFATGPFPGRID CCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHCCCEEEEECCCCCCEECEECCCCCCCHH WLPQRLLAFIAPHLQSAAPECHSR HHHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]