Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is yjgA [C]

Identifier: 34498653

GI number: 34498653

Start: 3482365

End: 3482907

Strand: Direct

Name: yjgA [C]

Synonym: CV_3198

Alternate gene names: 34498653

Gene position: 3482365-3482907 (Clockwise)

Preceding gene: 34498647

Following gene: 34498654

Centisome position: 73.3

GC content: 61.69

Gene sequence:

>543_bases
ATGACCGATTACCAGAACGACGACGACGGCTTCGTCAGCAAGTCCCAGCGCAAGCGCGACATGGACGCGCTGCAGGATCT
GGGCCGCGAACTGGTCGACCTGTCCAAGGACACGCTGAAGAAGATGCAGCTGCCGGAAGATCTGCTCACCGCCGTACTGG
ACTATAAACGTTTCACCGCCAACGGCGCGCTGCGCCGCCAGATGCAGTACATCGGCAAGCTGATGCGCGACGTCGATCCG
GAACCGATCCGCGAATACCTGAAAGTGCTGAAGGGCGAGTCGTCCGAACACATCGCCTGGCAACACCTGCTGGAACGCTG
GCGCGAAAAGCTGATGGCCGACGACAAGGCGCTGTCCGACTTCCTGGCCGCCTTCCCGGAAGGCGATCCGCAGCAGCTGC
GCACGCTGATGCGCAACGCCCGCAAGGAGCTGCAGGACAACAAACCGCCCAAGGCCTACCGCCAATTGTTCCAGGAAATC
AAGGCGCTGATCCCGGAGCCGGGCAAGCCGCGGCTGTGGCAAAAGGACGAGGACGAAGAATAA

Upstream 100 bases:

>100_bases
AATGTCTTATCTGCCATAGTATCTTTCGGAACAGTGGAAACGGCCGACGGCCTTTTCCGGTATCATACCAGCCTTGAAAA
CCGAGTGAGACCTAGCAACG

Downstream 100 bases:

>100_bases
TGCTGAAGATAGGCCTGGTTTCCATTTCCGACCGCGCCAGCCAAGGCGTGTACGAGGACAAGGGCCTGCCCGCGCTGCGG
GAATGGCTGGCGCGCGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MTDYQNDDDGFVSKSQRKRDMDALQDLGRELVDLSKDTLKKMQLPEDLLTAVLDYKRFTANGALRRQMQYIGKLMRDVDP
EPIREYLKVLKGESSEHIAWQHLLERWREKLMADDKALSDFLAAFPEGDPQQLRTLMRNARKELQDNKPPKAYRQLFQEI
KALIPEPGKPRLWQKDEDEE

Sequences:

>Translated_180_residues
MTDYQNDDDGFVSKSQRKRDMDALQDLGRELVDLSKDTLKKMQLPEDLLTAVLDYKRFTANGALRRQMQYIGKLMRDVDP
EPIREYLKVLKGESSEHIAWQHLLERWREKLMADDKALSDFLAAFPEGDPQQLRTLMRNARKELQDNKPPKAYRQLFQEI
KALIPEPGKPRLWQKDEDEE
>Mature_179_residues
TDYQNDDDGFVSKSQRKRDMDALQDLGRELVDLSKDTLKKMQLPEDLLTAVLDYKRFTANGALRRQMQYIGKLMRDVDPE
PIREYLKVLKGESSEHIAWQHLLERWREKLMADDKALSDFLAAFPEGDPQQLRTLMRNARKELQDNKPPKAYRQLFQEIK
ALIPEPGKPRLWQKDEDEE

Specific function: Unknown

COG id: COG3028

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0307 family

Homologues:

Organism=Escherichia coli, GI1790681, Length=159, Percent_Identity=44.6540880503145, Blast_Score=121, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3198_CHRVO (Q7NT63)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_902868.1
- ProteinModelPortal:   Q7NT63
- SMR:   Q7NT63
- GeneID:   2547061
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_3198
- NMPDR:   fig|243365.1.peg.3198
- HOGENOM:   HBG677712
- OMA:   KAPWEEE
- PhylomeDB:   Q7NT63
- ProtClustDB:   PRK05255
- BioCyc:   CVIO243365:CV_3198-MONOMER
- HAMAP:   MF_00765
- InterPro:   IPR023153
- InterPro:   IPR006839
- PIRSF:   PIRSF016183

Pfam domain/function: PF04751 DUF615

EC number: NA

Molecular weight: Translated: 21232; Mature: 21101

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDYQNDDDGFVSKSQRKRDMDALQDLGRELVDLSKDTLKKMQLPEDLLTAVLDYKRFTA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
NGALRRQMQYIGKLMRDVDPEPIREYLKVLKGESSEHIAWQHLLERWREKLMADDKALSD
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
FLAAFPEGDPQQLRTLMRNARKELQDNKPPKAYRQLFQEIKALIPEPGKPRLWQKDEDEE
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDYQNDDDGFVSKSQRKRDMDALQDLGRELVDLSKDTLKKMQLPEDLLTAVLDYKRFTA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
NGALRRQMQYIGKLMRDVDPEPIREYLKVLKGESSEHIAWQHLLERWREKLMADDKALSD
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
FLAAFPEGDPQQLRTLMRNARKELQDNKPPKAYRQLFQEIKALIPEPGKPRLWQKDEDEE
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782