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The map label for this gene is lrp [H]

Identifier: 34498636

GI number: 34498636

Start: 3462393

End: 3462881

Strand: Direct

Name: lrp [H]

Synonym: CV_3181

Alternate gene names: 34498636

Gene position: 3462393-3462881 (Clockwise)

Preceding gene: 34498631

Following gene: 34498637

Centisome position: 72.88

GC content: 61.55

Gene sequence:

>489_bases
GTGCACAAAATGCGCAAAATAGAATTAGACCGCTTCGACCTGCAGATCCTGCACCTGTTGCAGCAGGATGCCCGCGCCAC
CCATCAGAAGCTGGCGCAGGACATTCCGCTGTCCGCCTCCCAGATCGGCCGCCGCATCCAGCGCATGGAACAAAATGGCG
TCATCCAGGGTTACCAGGTGGCGCTCAACCCCGAGCATGTCGGCCTGTCGGTGATGGCCTTCGCCAACGTCAGCCTGGAG
CGGCACAACGAAGCCGCGCTGCAGGACTTCGCCCAGTCCATCGACAATCTGCCCGAGGTGCTGGAATGCTACGCTGCGGC
CGGCGAGGCCGACTACCTGCTGCGCATCGTGGTGCCGGACCTGCCGTCTTTGTCGTCCTTCGTGATGAACAAGCTGATGC
AGCTGTCGCTGGTGCGCAGCGTGAAGTCCACCATCGTGCTCAACGCGATCAAGCAGACGATGAAACTGCCCTTGTCGTCC
CTGCCCTGA

Upstream 100 bases:

>100_bases
GGCGATTTACTCTAGTTTAGCCCGGCCGCCATGCGGAAAGACCGCATTATTTGCCGTTTTGCCGGAAATTTTGCATACTT
ACCGCATAAAATGTCATAAA

Downstream 100 bases:

>100_bases
AAGCCGGTCCACGGCCTTTCGCGTTGCCAAGCAGGGTCTTGCAATGCCTCCTCCGCCTTGCATCCGGTCCGCTGGCAGGG
CTGCGTTGCCCGCCAAAAGA

Product: transcription regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MHKMRKIELDRFDLQILHLLQQDARATHQKLAQDIPLSASQIGRRIQRMEQNGVIQGYQVALNPEHVGLSVMAFANVSLE
RHNEAALQDFAQSIDNLPEVLECYAAAGEADYLLRIVVPDLPSLSSFVMNKLMQLSLVRSVKSTIVLNAIKQTMKLPLSS
LP

Sequences:

>Translated_162_residues
MHKMRKIELDRFDLQILHLLQQDARATHQKLAQDIPLSASQIGRRIQRMEQNGVIQGYQVALNPEHVGLSVMAFANVSLE
RHNEAALQDFAQSIDNLPEVLECYAAAGEADYLLRIVVPDLPSLSSFVMNKLMQLSLVRSVKSTIVLNAIKQTMKLPLSS
LP
>Mature_162_residues
MHKMRKIELDRFDLQILHLLQQDARATHQKLAQDIPLSASQIGRRIQRMEQNGVIQGYQVALNPEHVGLSVMAFANVSLE
RHNEAALQDFAQSIDNLPEVLECYAAAGEADYLLRIVVPDLPSLSSFVMNKLMQLSLVRSVKSTIVLNAIKQTMKLPLSS
LP

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=153, Percent_Identity=31.3725490196078, Blast_Score=103, Evalue=4e-24,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=32, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1790182, Length=151, Percent_Identity=26.4900662251656, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18156; Mature: 18156

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKMRKIELDRFDLQILHLLQQDARATHQKLAQDIPLSASQIGRRIQRMEQNGVIQGYQV
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEE
ALNPEHVGLSVMAFANVSLERHNEAALQDFAQSIDNLPEVLECYAAAGEADYLLRIVVPD
EECCCHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCC
LPSLSSFVMNKLMQLSLVRSVKSTIVLNAIKQTMKLPLSSLP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHKMRKIELDRFDLQILHLLQQDARATHQKLAQDIPLSASQIGRRIQRMEQNGVIQGYQV
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEE
ALNPEHVGLSVMAFANVSLERHNEAALQDFAQSIDNLPEVLECYAAAGEADYLLRIVVPD
EECCCHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCC
LPSLSSFVMNKLMQLSLVRSVKSTIVLNAIKQTMKLPLSSLP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]