Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
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Accession | NC_005085 |
Length | 4,751,080 |
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The map label for this gene is 34498637
Identifier: 34498637
GI number: 34498637
Start: 3463194
End: 3463754
Strand: Direct
Name: 34498637
Synonym: CV_3182
Alternate gene names: NA
Gene position: 3463194-3463754 (Clockwise)
Preceding gene: 34498636
Following gene: 34498639
Centisome position: 72.89
GC content: 64.88
Gene sequence:
>561_bases ATGGAATCGTCCGACTGTCCGCCGTTCGACACATTCAGCCCCAACCTGGCCGCCTCGCTGCGCCAGCTGTCGCTCCATGC CGGCCGCCTGAGCCAGGAACAGATTCTTCAATTCCACCGCGCGCTGCGCCCCGCCCAGGAAGACCTCGCGCCGTTTCGCC GCTTCGACGACGAACGCTATTGCCGCAACCGCATCTACCGCGACGAGCATTGCGAATTGCTGCTGCTGTGCTGGCGCGAA GGCCAGCGCAGCCAGATCCACAACCACAAGGGCAGCCTGTGCGGCGTCAGGGTGATAGAGGGCGTCGCCACCGAGACCGT GTTCGAAGCCACGCCATCCGGACAGCTGGCCGCGCGCGAAACCCGGGAGCTGGCCGCCGGCAGCCTGGTGATCAACGGCC ATCTGGACATCCACCAGGTAGCCAATCTGCAAGCCGATGGCGGAGATCTGGTCACCCTGCATCTCTATTCGCCGCCGCTG TCCCGGATGGAGCTGTTCGGCATGGAGCCGCAGCAACGGCGCGTGCAGTTGCTGGACGACTGCCTGGAATTCCAGATCTG A
Upstream 100 bases:
>100_bases TGCTGAAATCAATATAAGAAAACGGCCTGACATCTCCGAAAATAGCCGTCATTCCAGCATGACCGCCGCCGCGCCACGTT CAGAGATCAAGGAGAAACCG
Downstream 100 bases:
>100_bases TCCGGACAAACAAAAAGGCGCGGCCTGGGCCGCGCCTTTTCTCATATCCCGACGGATATCAGAAGCGGTACTGCATCTGC ACGCCCAGCAGGTGGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MESSDCPPFDTFSPNLAASLRQLSLHAGRLSQEQILQFHRALRPAQEDLAPFRRFDDERYCRNRIYRDEHCELLLLCWRE GQRSQIHNHKGSLCGVRVIEGVATETVFEATPSGQLAARETRELAAGSLVINGHLDIHQVANLQADGGDLVTLHLYSPPL SRMELFGMEPQQRRVQLLDDCLEFQI
Sequences:
>Translated_186_residues MESSDCPPFDTFSPNLAASLRQLSLHAGRLSQEQILQFHRALRPAQEDLAPFRRFDDERYCRNRIYRDEHCELLLLCWRE GQRSQIHNHKGSLCGVRVIEGVATETVFEATPSGQLAARETRELAAGSLVINGHLDIHQVANLQADGGDLVTLHLYSPPL SRMELFGMEPQQRRVQLLDDCLEFQI >Mature_186_residues MESSDCPPFDTFSPNLAASLRQLSLHAGRLSQEQILQFHRALRPAQEDLAPFRRFDDERYCRNRIYRDEHCELLLLCWRE GQRSQIHNHKGSLCGVRVIEGVATETVFEATPSGQLAARETRELAAGSLVINGHLDIHQVANLQADGGDLVTLHLYSPPL SRMELFGMEPQQRRVQLLDDCLEFQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56786147, Length=148, Percent_Identity=31.7567567567568, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21163; Mature: 21163
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESSDCPPFDTFSPNLAASLRQLSLHAGRLSQEQILQFHRALRPAQEDLAPFRRFDDERY CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHH CRNRIYRDEHCELLLLCWREGQRSQIHNHKGSLCGVRVIEGVATETVFEATPSGQLAARE HHHCCCCCCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH TRELAAGSLVINGHLDIHQVANLQADGGDLVTLHLYSPPLSRMELFGMEPQQRRVQLLDD HHHHHCCEEEEECCCCHHHHHCCCCCCCCEEEEEEECCCHHHHHHHCCCHHHHHHHHHHH CLEFQI HHHCCC >Mature Secondary Structure MESSDCPPFDTFSPNLAASLRQLSLHAGRLSQEQILQFHRALRPAQEDLAPFRRFDDERY CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHH CRNRIYRDEHCELLLLCWREGQRSQIHNHKGSLCGVRVIEGVATETVFEATPSGQLAARE HHHCCCCCCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH TRELAAGSLVINGHLDIHQVANLQADGGDLVTLHLYSPPLSRMELFGMEPQQRRVQLLDD HHHHHCCEEEEECCCCHHHHHCCCCCCCCEEEEEEECCCHHHHHHHCCCHHHHHHHHHHH CLEFQI HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA