Click here to switch to the map view.

The map label for this gene is hslR [H]

Identifier: 34498242

GI number: 34498242

Start: 3021497

End: 3021901

Strand: Reverse

Name: hslR [H]

Synonym: CV_2787

Alternate gene names: 34498242

Gene position: 3021901-3021497 (Counterclockwise)

Preceding gene: 34498243

Following gene: 34498241

Centisome position: 63.6

GC content: 68.15

Gene sequence:

>405_bases
ATGGCAAGGCAGGAAGAGCGGGACGACGACAAGGTGCGTCTGGACAAGTGGCTGTGGGCGGCGCGCTTCTTCAAGACGCG
CCAGCTGGCGCACGAGGCGCTGGAACTGGGCCGGGTGCTGGTCAACGGCGAGCGGGTGAAGGCCTCGCGCGTGGTGAAGG
AGGGCGACAGGCTGTTCCTGAGGCTCAACCAGCTGGAGTACGACGTGGAGGTGCTGCAGTTGGCCACCCAGCGCCGGCCG
GCCAAGGAAGCCGCGCTGATGTACCGCGAGGACGCCGCGTCCATCGCCGCCCGCGAGGAGCGGACGCTGCTGCTGAAGGC
CGAGCGCGCCAGCTTCCCGCATGGCGACGGCCGGCCCACCAAGAAGGCGCGCCGGGAAATTTCCCGCTTCAAATCGTCGT
TTTAG

Upstream 100 bases:

>100_bases
TCTTCACCGGCACGCCCGAAGGCGTGGCGCGCATCGAATCCGGCGACCAGCTGGACCTCAGCCTGCACGGGCAAGTGTCG
GCGCATTGGAAGGTGGCATG

Downstream 100 bases:

>100_bases
CCGTTGCCGGGCGGCGCCGGTCCGGTTCTGGCACCGGGCAGCGCCAGGCGTCAAACCATCAGAAAGATGAGCATGCAGTC
GCTGTTGCCGTTCGCTTCGT

Product: ribosome-associated heat shock protein Hsp15

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MARQEERDDDKVRLDKWLWAARFFKTRQLAHEALELGRVLVNGERVKASRVVKEGDRLFLRLNQLEYDVEVLQLATQRRP
AKEAALMYREDAASIAAREERTLLLKAERASFPHGDGRPTKKARREISRFKSSF

Sequences:

>Translated_134_residues
MARQEERDDDKVRLDKWLWAARFFKTRQLAHEALELGRVLVNGERVKASRVVKEGDRLFLRLNQLEYDVEVLQLATQRRP
AKEAALMYREDAASIAAREERTLLLKAERASFPHGDGRPTKKARREISRFKSSF
>Mature_133_residues
ARQEERDDDKVRLDKWLWAARFFKTRQLAHEALELGRVLVNGERVKASRVVKEGDRLFLRLNQLEYDVEVLQLATQRRPA
KEAALMYREDAASIAAREERTLLLKAERASFPHGDGRPTKKARREISRFKSSF

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=120, Percent_Identity=51.6666666666667, Blast_Score=112, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 15681; Mature: 15550

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARQEERDDDKVRLDKWLWAARFFKTRQLAHEALELGRVLVNGERVKASRVVKEGDRLFL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEE
RLNQLEYDVEVLQLATQRRPAKEAALMYREDAASIAAREERTLLLKAERASFPHGDGRPT
EHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCC
KKARREISRFKSSF
HHHHHHHHHHHCCC
>Mature Secondary Structure 
ARQEERDDDKVRLDKWLWAARFFKTRQLAHEALELGRVLVNGERVKASRVVKEGDRLFL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEE
RLNQLEYDVEVLQLATQRRPAKEAALMYREDAASIAAREERTLLLKAERASFPHGDGRPT
EHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCC
KKARREISRFKSSF
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]