| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498230
Identifier: 34498230
GI number: 34498230
Start: 3012316
End: 3012717
Strand: Reverse
Name: 34498230
Synonym: CV_2775
Alternate gene names: NA
Gene position: 3012717-3012316 (Counterclockwise)
Preceding gene: 34498231
Following gene: 34498229
Centisome position: 63.41
GC content: 49.75
Gene sequence:
>402_bases ATGAGAGCACCGGATGTGCGGTACCTATACCGAGGCTACGGTGACGTACACTATCTTGACGCCGTTATTGACTCGGAAGG TACGCTTGGCTTTGACATTCGCGCTGGAGGTAATAGCGCAACCCTCAGTGGTGGCAAAGATATGTTTTACGGGTTGATGA ACCGTTTGAAGCAGGATGGAGTGCAAGTAAATCAGATACGTGGAACTTGGCTCGACGGAGATGGCAGCGTTAACTATGAA ACGTACCGACAATTGACATCTGGTGCGAACCCATTGACGCCAGAGCAGGCGGCATTTTCAACTTGGACGGGTCAGCAAGC CAAAGGGTTCGGTTATACCCAGGTTGTTAAGCTTCAAGATTACGGAGTCGATGTTAAAGTCTGGTTTGGCAAGCCCAACT AA
Upstream 100 bases:
>100_bases GGATGCGTGAACGGGCCGGAAAAGCCTAGCGACCGAGAGTGCAACCGCAAGTGGGTACACGCCAAGGATTGACCTAACTG ATAGCTTTGTCCCACAGCGA
Downstream 100 bases:
>100_bases GGAAATAAGGACCATTCAGATGGCAATTCAGCCTCAAGAGTTTACGTCAGCGGATGCTGATGTTTGGAGAGCCAAGCTAA GTACCTATTTGTCGGTGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MRAPDVRYLYRGYGDVHYLDAVIDSEGTLGFDIRAGGNSATLSGGKDMFYGLMNRLKQDGVQVNQIRGTWLDGDGSVNYE TYRQLTSGANPLTPEQAAFSTWTGQQAKGFGYTQVVKLQDYGVDVKVWFGKPN
Sequences:
>Translated_133_residues MRAPDVRYLYRGYGDVHYLDAVIDSEGTLGFDIRAGGNSATLSGGKDMFYGLMNRLKQDGVQVNQIRGTWLDGDGSVNYE TYRQLTSGANPLTPEQAAFSTWTGQQAKGFGYTQVVKLQDYGVDVKVWFGKPN >Mature_133_residues MRAPDVRYLYRGYGDVHYLDAVIDSEGTLGFDIRAGGNSATLSGGKDMFYGLMNRLKQDGVQVNQIRGTWLDGDGSVNYE TYRQLTSGANPLTPEQAAFSTWTGQQAKGFGYTQVVKLQDYGVDVKVWFGKPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14701; Mature: 14701
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAPDVRYLYRGYGDVHYLDAVIDSEGTLGFDIRAGGNSATLSGGKDMFYGLMNRLKQDG CCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHCC VQVNQIRGTWLDGDGSVNYETYRQLTSGANPLTPEQAAFSTWTGQQAKGFGYTQVVKLQD CEEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC YGVDVKVWFGKPN CCCEEEEEECCCC >Mature Secondary Structure MRAPDVRYLYRGYGDVHYLDAVIDSEGTLGFDIRAGGNSATLSGGKDMFYGLMNRLKQDG CCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHCC VQVNQIRGTWLDGDGSVNYETYRQLTSGANPLTPEQAAFSTWTGQQAKGFGYTQVVKLQD CEEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC YGVDVKVWFGKPN CCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA