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The map label for this gene is rhsA [C]

Identifier: 34498231

GI number: 34498231

Start: 3012882

End: 3013694

Strand: Reverse

Name: rhsA [C]

Synonym: CV_2776

Alternate gene names: 34498231

Gene position: 3013694-3012882 (Counterclockwise)

Preceding gene: 34498232

Following gene: 34498230

Centisome position: 63.43

GC content: 66.91

Gene sequence:

>813_bases
TTGTTTGTCGACTACGACGCCCAGGGCCAGCTGAGCCAGCTGCGCACGGTGTACCTGAAAGACGGCCAAAGCCAGACGCT
GACCCGCACCCGCTACGGCTACGACGCCCAGGGGCGTTTGAGCAGCGTCACCACCGATCTCACCCCCGACGACAACAGCG
TGGCCGACGGCCAGGTCTACACCACCCGCTACCTCTACGACGGCGCCAGCCGCCGGGTGGCCAGCCTGCAACAGAGCGAC
GGCAGCCAACTCGACTTCAGCTACGTCCAGGTCGGGTCCGACTACCGGATCCAGACCGTCAGCGACGTGCGCGACGGCCA
GAAGCTGACCACCCGCTTCGACTACGACGCCGGCGGCGGGCGCACCACCGTCACCGACGCCGCAAACCAGGCCACCCAGT
TCGACTACGACAACGGCCAGCTGCGCCGCCTCGCCGGCGGCGGGGTGGAGCAACGCTACAACTACGACAGCCACGCCCGG
GTCAGCGACGTCACCGACGGCCGCGGCCAGAGCAGCCACTACGACTACGACGCCGCCGGCAACCGCGTCGGCGCGCGCGA
CGCGCAGCAACGGCAAACCAGCCGCCGCTACAACGCGCAGAACCAGCTGATCAGCGAAACCATCGCCGGCGTCGGCACCA
CCCGCCGTATCTACGACGCCAGCGGCCTGCATCTGCGTTTCAGCGTCAGCGCCGAAGGGCGGGTGCCGGCAAGTACCTGC
TCAACTGCTTCGCGCTTGAGGGCCTCTGGGAAAGTACGTCTGGTCTTGGTCATGAACACTGCTCCTTGGTGGGGATTATC
CACCTTAAGTTAG

Upstream 100 bases:

>100_bases
CGCCCAAGGCTGGACCTAGACCGACGGCGCCAGCCAGGCGCAGGAGCGCTACGACGCCGGCGGCCGCATCGTCAGCCTGA
AGCGCGCCGGCGGCGAAGCC

Downstream 100 bases:

>100_bases
TGTCCATGGGGATCGGGACAGACCATTGGCGAAGACGCGGGGGCGATGAAGGAGATGAGGGCGCGGATGCGTGAACGGGC
CGGAAAAGCCTAGCGACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Rhs Family Protein; YD Repeat-Containing Protein; Rhs Family Protein-Like Protein

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MFVDYDAQGQLSQLRTVYLKDGQSQTLTRTRYGYDAQGRLSSVTTDLTPDDNSVADGQVYTTRYLYDGASRRVASLQQSD
GSQLDFSYVQVGSDYRIQTVSDVRDGQKLTTRFDYDAGGGRTTVTDAANQATQFDYDNGQLRRLAGGGVEQRYNYDSHAR
VSDVTDGRGQSSHYDYDAAGNRVGARDAQQRQTSRRYNAQNQLISETIAGVGTTRRIYDASGLHLRFSVSAEGRVPASTC
STASRLRASGKVRLVLVMNTAPWWGLSTLS

Sequences:

>Translated_270_residues
MFVDYDAQGQLSQLRTVYLKDGQSQTLTRTRYGYDAQGRLSSVTTDLTPDDNSVADGQVYTTRYLYDGASRRVASLQQSD
GSQLDFSYVQVGSDYRIQTVSDVRDGQKLTTRFDYDAGGGRTTVTDAANQATQFDYDNGQLRRLAGGGVEQRYNYDSHAR
VSDVTDGRGQSSHYDYDAAGNRVGARDAQQRQTSRRYNAQNQLISETIAGVGTTRRIYDASGLHLRFSVSAEGRVPASTC
STASRLRASGKVRLVLVMNTAPWWGLSTLS
>Mature_270_residues
MFVDYDAQGQLSQLRTVYLKDGQSQTLTRTRYGYDAQGRLSSVTTDLTPDDNSVADGQVYTTRYLYDGASRRVASLQQSD
GSQLDFSYVQVGSDYRIQTVSDVRDGQKLTTRFDYDAGGGRTTVTDAANQATQFDYDNGQLRRLAGGGVEQRYNYDSHAR
VSDVTDGRGQSSHYDYDAAGNRVGARDAQQRQTSRRYNAQNQLISETIAGVGTTRRIYDASGLHLRFSVSAEGRVPASTC
STASRLRASGKVRLVLVMNTAPWWGLSTLS

Specific function: Rhs Elements Have A Nonessential Function. They May Play An Important Role In The Natural Ecology Of The Cell. [C]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29761; Mature: 29761

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVDYDAQGQLSQLRTVYLKDGQSQTLTRTRYGYDAQGRLSSVTTDLTPDDNSVADGQVY
CEECCCCCCCHHHEEEEEEECCCCCCEEEEECCCCCCCCHHHEEECCCCCCCCCCCCEEE
TTRYLYDGASRRVASLQQSDGSQLDFSYVQVGSDYRIQTVSDVRDGQKLTTRFDYDAGGG
EEEEEECCCHHHHHHHHHCCCCEEEEEEEEECCCCEEEEHHHCCCCCEEEEEECCCCCCC
RTTVTDAANQATQFDYDNGQLRRLAGGGVEQRYNYDSHARVSDVTDGRGQSSHYDYDAAG
CEEEECCCCCCEEEECCCCCEEEECCCCCHHHCCCCCCCEECCCCCCCCCCCCCCCCCCC
NRVGARDAQQRQTSRRYNAQNQLISETIAGVGTTRRIYDASGLHLRFSVSAEGRVPASTC
CCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCCCCHHHH
STASRLRASGKVRLVLVMNTAPWWGLSTLS
HHHHHHHCCCCEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MFVDYDAQGQLSQLRTVYLKDGQSQTLTRTRYGYDAQGRLSSVTTDLTPDDNSVADGQVY
CEECCCCCCCHHHEEEEEEECCCCCCEEEEECCCCCCCCHHHEEECCCCCCCCCCCCEEE
TTRYLYDGASRRVASLQQSDGSQLDFSYVQVGSDYRIQTVSDVRDGQKLTTRFDYDAGGG
EEEEEECCCHHHHHHHHHCCCCEEEEEEEEECCCCEEEEHHHCCCCCEEEEEECCCCCCC
RTTVTDAANQATQFDYDNGQLRRLAGGGVEQRYNYDSHARVSDVTDGRGQSSHYDYDAAG
CEEEECCCCCCEEEECCCCCEEEECCCCCHHHCCCCCCCEECCCCCCCCCCCCCCCCCCC
NRVGARDAQQRQTSRRYNAQNQLISETIAGVGTTRRIYDASGLHLRFSVSAEGRVPASTC
CCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCCCCHHHH
STASRLRASGKVRLVLVMNTAPWWGLSTLS
HHHHHHHCCCCEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA