| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34498229
Identifier: 34498229
GI number: 34498229
Start: 3012024
End: 3012296
Strand: Reverse
Name: 34498229
Synonym: CV_2774
Alternate gene names: NA
Gene position: 3012296-3012024 (Counterclockwise)
Preceding gene: 34498230
Following gene: 34498228
Centisome position: 63.4
GC content: 50.55
Gene sequence:
>273_bases ATGGCAATTCAGCCTCAAGAGTTTACGTCAGCGGATGCTGATGTTTGGAGAGCCAAGCTAAGTACCTATTTGTCGGTGAG TAGGTTGCTGCGCGACCTTTCTGCGGAGTATGGGGTGTCGCGAAATGATGCCGGAGTACTGCTTTATGAGCTCTTTGATA GTTTTTCGCTAGACGACATTTCCTACGTATGGAAGTGGGACTTCGATGGAAGTGGCAAGGGACTCTCGGACGAGGGGCTG GATCAGCGACTTGGTCACTTGTTGGGTAAGTGA
Upstream 100 bases:
>100_bases AAAGGGTTCGGTTATACCCAGGTTGTTAAGCTTCAAGATTACGGAGTCGATGTTAAAGTCTGGTTTGGCAAGCCCAACTA AGGAAATAAGGACCATTCAG
Downstream 100 bases:
>100_bases CGGTACGTTAGAACTGTTGGGACAGAGAGGGCGTAGCTCCAAAAGGTGAGTTGCCGCTATTCTGGTTGTCGCAACCAGGT GGTCTTAACGCCACGGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MAIQPQEFTSADADVWRAKLSTYLSVSRLLRDLSAEYGVSRNDAGVLLYELFDSFSLDDISYVWKWDFDGSGKGLSDEGL DQRLGHLLGK
Sequences:
>Translated_90_residues MAIQPQEFTSADADVWRAKLSTYLSVSRLLRDLSAEYGVSRNDAGVLLYELFDSFSLDDISYVWKWDFDGSGKGLSDEGL DQRLGHLLGK >Mature_89_residues AIQPQEFTSADADVWRAKLSTYLSVSRLLRDLSAEYGVSRNDAGVLLYELFDSFSLDDISYVWKWDFDGSGKGLSDEGLD QRLGHLLGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10107; Mature: 9976
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIQPQEFTSADADVWRAKLSTYLSVSRLLRDLSAEYGVSRNDAGVLLYELFDSFSLDDI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC SYVWKWDFDGSGKGLSDEGLDQRLGHLLGK CEEEEECCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure AIQPQEFTSADADVWRAKLSTYLSVSRLLRDLSAEYGVSRNDAGVLLYELFDSFSLDDI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC SYVWKWDFDGSGKGLSDEGLDQRLGHLLGK CEEEEECCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA