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The map label for this gene is ychE [C]

Identifier: 34498184

GI number: 34498184

Start: 2958536

End: 2959237

Strand: Reverse

Name: ychE [C]

Synonym: CV_2729

Alternate gene names: 34498184

Gene position: 2959237-2958536 (Counterclockwise)

Preceding gene: 34498185

Following gene: 34498183

Centisome position: 62.29

GC content: 66.24

Gene sequence:

>702_bases
ATGCAGTTGCTGTCCACCTTCATTACCAAGTTTTTGTTCGTGATGGCGGCGCTGTTGCCGATCATGAATCCGCCCGGCCT
GGTGCCCATCTTCATCTCGATGACGGCACGCAACACGCCGCAGCAGCGGCGCTACCTGGCGCGGCGCATCGCGATCTATT
GCGCGCTGCTGCTGGTGGGCAGCATGTTCGTCGGCGGCTACGTGCTGTCCTTCTTCGGCGTGTCGCTGCCGGTGGTGCAG
ATGTCCGGCGGCTTGCTGATCACCTTCGCCGCCTGGCGCATGCTGAACGACACGCCGGCCGAGTCCAGCCAGCCGTCCGC
CGAGCAGGCCAGGGTGGACAGCCAGGCCGAGCTCAAGCAGCGCGCCTTCTATCCGTTGACCTTTCCGCTGACCGTGGGGC
CGGGCTCGGTGTCGGTGGCCATCACCATCGGCGCCACGCTGACCGGCAGCGGCAAGGGGCTGGTGCGCTTCGTGATCAGC
CCGATCGCCGGACTATCGGCGGTGCTGGTGGGCAGCACCCTGGTCTACCTGTGCTACGCCAACGCCGACAAGCTGCTGCG
CTATCTGGGCCAGACCGGCTCCGTGGTGTTCCTGCGGCTGTCCGCCTTCATTCTGCTGTGCCTGGGCGTGCAGATCATGT
GGGACGGCTTCGGCGAGCTGGCCAGCCAGTGGCTGCGGGACAACGCCGGGCTGCTGCATTGA

Upstream 100 bases:

>100_bases
GCTGGAAAAATGGTTGACCAAGCCCGCTGGCAAGCGGGCTTTTTTTATGGTTTCATCCGCTATCCTGACAACATTTTAAA
CCTTCCAGGCGGGGTGCCGT

Downstream 100 bases:

>100_bases
GCGCCATGCCATGCGTTTGCCGCTTGGCCGGCATTTATTGACTTGAGGCAAAGTTGACGGGAGGAGGAGAAGGCGGCAGA
CTGTGTTCAATGGGAATCCA

Product: multiple antibiotic resistance protein MarC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MQLLSTFITKFLFVMAALLPIMNPPGLVPIFISMTARNTPQQRRYLARRIAIYCALLLVGSMFVGGYVLSFFGVSLPVVQ
MSGGLLITFAAWRMLNDTPAESSQPSAEQARVDSQAELKQRAFYPLTFPLTVGPGSVSVAITIGATLTGSGKGLVRFVIS
PIAGLSAVLVGSTLVYLCYANADKLLRYLGQTGSVVFLRLSAFILLCLGVQIMWDGFGELASQWLRDNAGLLH

Sequences:

>Translated_233_residues
MQLLSTFITKFLFVMAALLPIMNPPGLVPIFISMTARNTPQQRRYLARRIAIYCALLLVGSMFVGGYVLSFFGVSLPVVQ
MSGGLLITFAAWRMLNDTPAESSQPSAEQARVDSQAELKQRAFYPLTFPLTVGPGSVSVAITIGATLTGSGKGLVRFVIS
PIAGLSAVLVGSTLVYLCYANADKLLRYLGQTGSVVFLRLSAFILLCLGVQIMWDGFGELASQWLRDNAGLLH
>Mature_233_residues
MQLLSTFITKFLFVMAALLPIMNPPGLVPIFISMTARNTPQQRRYLARRIAIYCALLLVGSMFVGGYVLSFFGVSLPVVQ
MSGGLLITFAAWRMLNDTPAESSQPSAEQARVDSQAELKQRAFYPLTFPLTVGPGSVSVAITIGATLTGSGKGLVRFVIS
PIAGLSAVLVGSTLVYLCYANADKLLRYLGQTGSVVFLRLSAFILLCLGVQIMWDGFGELASQWLRDNAGLLH

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=203, Percent_Identity=29.064039408867, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1787809, Length=206, Percent_Identity=26.6990291262136, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789842, Length=211, Percent_Identity=24.6445497630332, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 25158; Mature: 25158

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLLSTFITKFLFVMAALLPIMNPPGLVPIFISMTARNTPQQRRYLARRIAIYCALLLVG
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
SMFVGGYVLSFFGVSLPVVQMSGGLLITFAAWRMLNDTPAESSQPSAEQARVDSQAELKQ
HHHHHHHHHHHHHCCCHHEEECCCEEEHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHH
RAFYPLTFPLTVGPGSVSVAITIGATLTGSGKGLVRFVISPIAGLSAVLVGSTLVYLCYA
HCCCCEEEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NADKLLRYLGQTGSVVFLRLSAFILLCLGVQIMWDGFGELASQWLRDNAGLLH
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQLLSTFITKFLFVMAALLPIMNPPGLVPIFISMTARNTPQQRRYLARRIAIYCALLLVG
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
SMFVGGYVLSFFGVSLPVVQMSGGLLITFAAWRMLNDTPAESSQPSAEQARVDSQAELKQ
HHHHHHHHHHHHHCCCHHEEECCCEEEHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHH
RAFYPLTFPLTVGPGSVSVAITIGATLTGSGKGLVRFVISPIAGLSAVLVGSTLVYLCYA
HCCCCEEEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NADKLLRYLGQTGSVVFLRLSAFILLCLGVQIMWDGFGELASQWLRDNAGLLH
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]