Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
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Accession | NC_005085 |
Length | 4,751,080 |
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The map label for this gene is 34498166
Identifier: 34498166
GI number: 34498166
Start: 2934490
End: 2935746
Strand: Reverse
Name: 34498166
Synonym: CV_2711
Alternate gene names: NA
Gene position: 2935746-2934490 (Counterclockwise)
Preceding gene: 34498168
Following gene: 34498165
Centisome position: 61.79
GC content: 69.53
Gene sequence:
>1257_bases TTGATTCAAATCATTCTCGTTTCCCCTCCCGGGCCGGATACTGCGGGCACCCCCACCCGTCGGAGTTTCGCCATGGCGCG CGCTCATCCTTTCTTTTCCGCCCCGCACCGGGCGGCTTTCCTGCCAGGCATGCTGCTGGCCATTCTGCTGCTGGCGGCGT GGAGCGCCGAGCTGGCCGCGCGCCTGTTCGGCCTTGGCTTGCCCTTGGCGCTGCCGGCCATGCTGGCTCATGGCTTCCTG ATGCTGTTCGGCTTCTTCCCCTTGTTCATGGCCGGCTTTCTGTTCACCGCCGGGCCGCGTTGGCTGAACGTGCCGCCGCC TGGCCGTGGGGCTTATCTGCTGGTGCCGGCGCTGCTGGTTGCGGGGTTGTTGACGTGGCTGATCGGCGCGGCGGTCGGCG GTGCCTGGCTGCTGGCCGGCCATCTGGTCTACAGCCTGGGCTTTCTCGGCCTGGCCGGCGGCTTCGCCCGCTTGTTGCTG GCGAGTCCCGCGCCGGACCGGCGCCATGCTTGGGCGGTGCTGTCGGCTTTCGGCATCGGCGTCCTGGCGCTCGCCGCCGC CGGCTATTGGCTGTTGAGCGGCGATGTCCGCGGCTGGCTATGGATGCGGGATCTGGCGCTGTGGGGCTTTCTGCTGCCGG TGTTTCTGACCGTGTGCCACCGCATGTTGCCTTTTTTCTCCGCCAATGCGCTGGCGCCGTACCAGCCGTGGCGTCCCTGG TGGCTGCTGGCGGCGATGCTGGGCGGCTCGCTGGGCCACGGCCTGTTGTCCATCGCCGGCTGGCCGTCCTGGGGGCTGGA CCTATGCCTGGCCGCGCTGTTTGGCTACACCAGCTGGCGCTGGCGGCTGCTGGCTTCGCTGCGGGTGAGGCTGCTGGCCA TGCTGCATCTGTCCTTCGCCTGGCTGGCCGCCGGCTTCGCGCTGTACGCCTGGCAAGGCGCGTTCGGCGGCCTGGCCTGG GCCCCCTTGCATGCGATCTCGGTCGGCTTTTTTCTGACCATGCTGATCGCCTTCGTGTCCCGGGTGTCGCTCGGCCATTC CGGGCAGGCGCTCGAAGCCGGCCGGATGCTGTGGGGCCTGTATCTGGCCGCGCAGTGGCTGGCGCTGGCGCGGGTGGCGG CCGACTTGCTGCCGATAGCCTGGCGCGGCGGCATGTACGGCCTGGCCGCGCTGGGCTGGCTGCTGACCCTGTCGCTGTGG GGCGGCCGCTTCCTGCCTGTTTACCTGCGGCCGCGCGCCGACGGCAAGGATGGTTGA
Upstream 100 bases:
>100_bases GTTGAGAATGTCGGACATGCTGGCTTCTATGTTGACACAACGAATGGGCCATCATGCAGAACATCCGGCGGGATGGCAAG CGCAGGCGCTTTCCGGATGC
Downstream 100 bases:
>100_bases GCGGACCCGAATTTCAAACTGGAGAACATCAATGAACGCATCCGAAATATTGATCGGCCAGCATCGCGATTGCGACGCCC GCTTCGCCGATGCCGAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MIQIILVSPPGPDTAGTPTRRSFAMARAHPFFSAPHRAAFLPGMLLAILLLAAWSAELAARLFGLGLPLALPAMLAHGFL MLFGFFPLFMAGFLFTAGPRWLNVPPPGRGAYLLVPALLVAGLLTWLIGAAVGGAWLLAGHLVYSLGFLGLAGGFARLLL ASPAPDRRHAWAVLSAFGIGVLALAAAGYWLLSGDVRGWLWMRDLALWGFLLPVFLTVCHRMLPFFSANALAPYQPWRPW WLLAAMLGGSLGHGLLSIAGWPSWGLDLCLAALFGYTSWRWRLLASLRVRLLAMLHLSFAWLAAGFALYAWQGAFGGLAW APLHAISVGFFLTMLIAFVSRVSLGHSGQALEAGRMLWGLYLAAQWLALARVAADLLPIAWRGGMYGLAALGWLLTLSLW GGRFLPVYLRPRADGKDG
Sequences:
>Translated_418_residues MIQIILVSPPGPDTAGTPTRRSFAMARAHPFFSAPHRAAFLPGMLLAILLLAAWSAELAARLFGLGLPLALPAMLAHGFL MLFGFFPLFMAGFLFTAGPRWLNVPPPGRGAYLLVPALLVAGLLTWLIGAAVGGAWLLAGHLVYSLGFLGLAGGFARLLL ASPAPDRRHAWAVLSAFGIGVLALAAAGYWLLSGDVRGWLWMRDLALWGFLLPVFLTVCHRMLPFFSANALAPYQPWRPW WLLAAMLGGSLGHGLLSIAGWPSWGLDLCLAALFGYTSWRWRLLASLRVRLLAMLHLSFAWLAAGFALYAWQGAFGGLAW APLHAISVGFFLTMLIAFVSRVSLGHSGQALEAGRMLWGLYLAAQWLALARVAADLLPIAWRGGMYGLAALGWLLTLSLW GGRFLPVYLRPRADGKDG >Mature_418_residues MIQIILVSPPGPDTAGTPTRRSFAMARAHPFFSAPHRAAFLPGMLLAILLLAAWSAELAARLFGLGLPLALPAMLAHGFL MLFGFFPLFMAGFLFTAGPRWLNVPPPGRGAYLLVPALLVAGLLTWLIGAAVGGAWLLAGHLVYSLGFLGLAGGFARLLL ASPAPDRRHAWAVLSAFGIGVLALAAAGYWLLSGDVRGWLWMRDLALWGFLLPVFLTVCHRMLPFFSANALAPYQPWRPW WLLAAMLGGSLGHGLLSIAGWPSWGLDLCLAALFGYTSWRWRLLASLRVRLLAMLHLSFAWLAAGFALYAWQGAFGGLAW APLHAISVGFFLTMLIAFVSRVSLGHSGQALEAGRMLWGLYLAAQWLALARVAADLLPIAWRGGMYGLAALGWLLTLSLW GGRFLPVYLRPRADGKDG
Specific function: Unknown
COG id: COG3213
COG function: function code P; Uncharacterized protein involved in response to NO
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45099; Mature: 45099
Theoretical pI: Translated: 11.69; Mature: 11.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQIILVSPPGPDTAGTPTRRSFAMARAHPFFSAPHRAAFLPGMLLAILLLAAWSAELAA CEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RLFGLGLPLALPAMLAHGFLMLFGFFPLFMAGFLFTAGPRWLNVPPPGRGAYLLVPALLV HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHH AGLLTWLIGAAVGGAWLLAGHLVYSLGFLGLAGGFARLLLASPAPDRRHAWAVLSAFGIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VLALAAAGYWLLSGDVRGWLWMRDLALWGFLLPVFLTVCHRMLPFFSANALAPYQPWRPW HHHHHHHCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH WLLAAMLGGSLGHGLLSIAGWPSWGLDLCLAALFGYTSWRWRLLASLRVRLLAMLHLSFA HHHHHHHCCHHHCHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH WLAAGFALYAWQGAFGGLAWAPLHAISVGFFLTMLIAFVSRVSLGHSGQALEAGRMLWGL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YLAAQWLALARVAADLLPIAWRGGMYGLAALGWLLTLSLWGGRFLPVYLRPRADGKDG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MIQIILVSPPGPDTAGTPTRRSFAMARAHPFFSAPHRAAFLPGMLLAILLLAAWSAELAA CEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RLFGLGLPLALPAMLAHGFLMLFGFFPLFMAGFLFTAGPRWLNVPPPGRGAYLLVPALLV HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHH AGLLTWLIGAAVGGAWLLAGHLVYSLGFLGLAGGFARLLLASPAPDRRHAWAVLSAFGIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VLALAAAGYWLLSGDVRGWLWMRDLALWGFLLPVFLTVCHRMLPFFSANALAPYQPWRPW HHHHHHHCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH WLLAAMLGGSLGHGLLSIAGWPSWGLDLCLAALFGYTSWRWRLLASLRVRLLAMLHLSFA HHHHHHHCCHHHCHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH WLAAGFALYAWQGAFGGLAWAPLHAISVGFFLTMLIAFVSRVSLGHSGQALEAGRMLWGL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YLAAQWLALARVAADLLPIAWRGGMYGLAALGWLLTLSLWGGRFLPVYLRPRADGKDG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA