Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
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Accession | NC_005085 |
Length | 4,751,080 |
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The map label for this gene is 34498165
Identifier: 34498165
GI number: 34498165
Start: 2934027
End: 2934497
Strand: Reverse
Name: 34498165
Synonym: CV_2710
Alternate gene names: NA
Gene position: 2934497-2934027 (Counterclockwise)
Preceding gene: 34498166
Following gene: 34498164
Centisome position: 61.76
GC content: 67.3
Gene sequence:
>471_bases ATGGTTGAGCGGACCCGAATTTCAAACTGGAGAACATCAATGAACGCATCCGAAATATTGATCGGCCAGCATCGCGATTG CGACGCCCGCTTCGCCGATGCCGAGCAGGCCGCGCGCGCGCACGACTGGCCCGCCGCCGAGGCGGCCTTCGCGGCCATGC GCGGCGAGATGGAAGACCATTTCCGGCTGGAGGAGGACAGGCTGTTTCCCGCCTTCGAGCAGGCCAGCGGCATGCGCGCC GGCCCGACCGCGGTGATGCGCGCCGAGCACGCGCAGATGCGGCAGCTGCTGGACGGCATGGCGCAGGCGCTGGCCGCGCG CGACGGCGACGGCTTTCTGGCCGAGGCCGACACGCTGCTGATCCTGACCCAGCAGCACAATATGAAAGAGGAGAACATCC TGTATCCGATGTGCGAGCGCAGCGTGCCGGACCTGCCGCGCCTGCTGCAAGGGGCCGGACATGCCGCTTGA
Upstream 100 bases:
>100_bases GGCATGTACGGCCTGGCCGCGCTGGGCTGGCTGCTGACCCTGTCGCTGTGGGGCGGCCGCTTCCTGCCTGTTTACCTGCG GCCGCGCGCCGACGGCAAGG
Downstream 100 bases:
>100_bases CCTGCGCGCGCTGCCGCCGCCCGAGCCCATGGACATCGTGTTGCACCAGGCCGAGCAACTGGCGGCCGGCCAGTCGGTCC GTTTCGTGCTGCCGCATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MVERTRISNWRTSMNASEILIGQHRDCDARFADAEQAARAHDWPAAEAAFAAMRGEMEDHFRLEEDRLFPAFEQASGMRA GPTAVMRAEHAQMRQLLDGMAQALAARDGDGFLAEADTLLILTQQHNMKEENILYPMCERSVPDLPRLLQGAGHAA
Sequences:
>Translated_156_residues MVERTRISNWRTSMNASEILIGQHRDCDARFADAEQAARAHDWPAAEAAFAAMRGEMEDHFRLEEDRLFPAFEQASGMRA GPTAVMRAEHAQMRQLLDGMAQALAARDGDGFLAEADTLLILTQQHNMKEENILYPMCERSVPDLPRLLQGAGHAA >Mature_156_residues MVERTRISNWRTSMNASEILIGQHRDCDARFADAEQAARAHDWPAAEAAFAAMRGEMEDHFRLEEDRLFPAFEQASGMRA GPTAVMRAEHAQMRQLLDGMAQALAARDGDGFLAEADTLLILTQQHNMKEENILYPMCERSVPDLPRLLQGAGHAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17407; Mature: 17407
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVERTRISNWRTSMNASEILIGQHRDCDARFADAEQAARAHDWPAAEAAFAAMRGEMEDH CCCCCCCCCHHCCCCCCCEEECCCCCCCCCHHCHHHHHHCCCCCHHHHHHHHHHCCCHHH FRLEEDRLFPAFEQASGMRAGPTAVMRAEHAQMRQLLDGMAQALAARDGDGFLAEADTLL HCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEE ILTQQHNMKEENILYPMCERSVPDLPRLLQGAGHAA EEECCCCCCCCCCCCHHHHCCCCHHHHHHHCCCCCC >Mature Secondary Structure MVERTRISNWRTSMNASEILIGQHRDCDARFADAEQAARAHDWPAAEAAFAAMRGEMEDH CCCCCCCCCHHCCCCCCCEEECCCCCCCCCHHCHHHHHHCCCCCHHHHHHHHHHCCCHHH FRLEEDRLFPAFEQASGMRAGPTAVMRAEHAQMRQLLDGMAQALAARDGDGFLAEADTLL HCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEE ILTQQHNMKEENILYPMCERSVPDLPRLLQGAGHAA EEECCCCCCCCCCCCHHHHCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA