Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34498148

Identifier: 34498148

GI number: 34498148

Start: 2916581

End: 2917141

Strand: Reverse

Name: 34498148

Synonym: CV_2693

Alternate gene names: NA

Gene position: 2917141-2916581 (Counterclockwise)

Preceding gene: 34498149

Following gene: 34498144

Centisome position: 61.4

GC content: 60.43

Gene sequence:

>561_bases
ATGGCAAGCTGCGGGTTTGCCAAAATTCTGGAGAAATCCGTGACAAAAGAACAATTGACTATCCATCTGCGCATCCAGTA
CTTGTGCAAGGCCGTGTTGGCCTTGTCCATCGGCGCGTTCGGCTTGCTGGTGGCGAGCGGAAATATCATCGATTACGACT
CCAACTGGCAATTCGTCCGCCACGTGCTGTCGATGGATGCCTTGGAGCCTTGGTTCAATGGCGCGGCCTTGGAGGGCAGG
GCAGTGCGCGATCCGTTCGGGCAGCAACTGGCTTATTTCGCCATCATTGTCGGCGAAATGGCTTGCGGGCTGTTATGCAT
GGCGGGCGGGGTCGGCATGCTGAGGGCGGCGGCCGGCCGCGACGGCCTGGCCTGGGGCAAGAGCCTGTTCACACTGGGCG
CGCTGGTCGCCGTGCTGGTCTGGTATTTCGGCTTCGCGGTGGTGGGCGGCGAGTATTTCGCGATGTGGGCCAGCAAGTGG
AATGGCCAGATGAAGGCATACGCCTTCGTCGGCTTCATCCTGCTCAGCCTGGTTTACATCCGTCAGCGGGAGGAGGCCTG
A

Upstream 100 bases:

>100_bases
GGTGCTGAAGGCGATTCCGGCGCGTTGAGCGGTTTCACCCGAAGATGAAGAACGGTCTGGCTTTGCCAGGCCGTTTTTTT
ATTTCGGCCGCGGGCTGATC

Downstream 100 bases:

>100_bases
TCGCCGGCGTTCCGCGGCCCCTGGCCGGAAAAGTGGCGGCCGAAGCCTATGATCACCAGCGCGCTGGTGAAGATGATCTG
CAGGTCGGCCAGCAGCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MASCGFAKILEKSVTKEQLTIHLRIQYLCKAVLALSIGAFGLLVASGNIIDYDSNWQFVRHVLSMDALEPWFNGAALEGR
AVRDPFGQQLAYFAIIVGEMACGLLCMAGGVGMLRAAAGRDGLAWGKSLFTLGALVAVLVWYFGFAVVGGEYFAMWASKW
NGQMKAYAFVGFILLSLVYIRQREEA

Sequences:

>Translated_186_residues
MASCGFAKILEKSVTKEQLTIHLRIQYLCKAVLALSIGAFGLLVASGNIIDYDSNWQFVRHVLSMDALEPWFNGAALEGR
AVRDPFGQQLAYFAIIVGEMACGLLCMAGGVGMLRAAAGRDGLAWGKSLFTLGALVAVLVWYFGFAVVGGEYFAMWASKW
NGQMKAYAFVGFILLSLVYIRQREEA
>Mature_185_residues
ASCGFAKILEKSVTKEQLTIHLRIQYLCKAVLALSIGAFGLLVASGNIIDYDSNWQFVRHVLSMDALEPWFNGAALEGRA
VRDPFGQQLAYFAIIVGEMACGLLCMAGGVGMLRAAAGRDGLAWGKSLFTLGALVAVLVWYFGFAVVGGEYFAMWASKWN
GQMKAYAFVGFILLSLVYIRQREEA

Specific function: Unknown

COG id: COG5472

COG function: function code S; Predicted small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20306; Mature: 20175

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASCGFAKILEKSVTKEQLTIHLRIQYLCKAVLALSIGAFGLLVASGNIIDYDSNWQFVR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH
HVLSMDALEPWFNGAALEGRAVRDPFGQQLAYFAIIVGEMACGLLCMAGGVGMLRAAAGR
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
DGLAWGKSLFTLGALVAVLVWYFGFAVVGGEYFAMWASKWNGQMKAYAFVGFILLSLVYI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RQREEA
HHHCCC
>Mature Secondary Structure 
ASCGFAKILEKSVTKEQLTIHLRIQYLCKAVLALSIGAFGLLVASGNIIDYDSNWQFVR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH
HVLSMDALEPWFNGAALEGRAVRDPFGQQLAYFAIIVGEMACGLLCMAGGVGMLRAAAGR
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
DGLAWGKSLFTLGALVAVLVWYFGFAVVGGEYFAMWASKWNGQMKAYAFVGFILLSLVYI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RQREEA
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA