Click here to switch to the map view.

The map label for this gene is gsiC [H]

Identifier: 34498142

GI number: 34498142

Start: 2909016

End: 2909957

Strand: Reverse

Name: gsiC [H]

Synonym: CV_2687

Alternate gene names: 34498142

Gene position: 2909957-2909016 (Counterclockwise)

Preceding gene: 34498143

Following gene: 34498141

Centisome position: 61.25

GC content: 61.89

Gene sequence:

>942_bases
ATGTTCGCATTCATCATTCGCCGGCTCTGGCAGATGATCCCCACCATGCTGGGCGTCATGCTGCTGGTGTTCGTGCTGTT
CAACTGGGTGGGCGGCGACCCCACCTTCATTCTGGAAGGCAAGCGCCTGACGCCGGAGATGCTGGCCAATATCCGCGTGC
AGCTGGGCCTGGACAAGAGCCTGCCGGAGCAGTTCCTGCTGTTCGTCAAGCAGGTGTTCACTTACGACTTCGGCAATTCC
TGGGCCACGCAGCAATCGGTTTCCGGCACATTGGCCAACCGCGTCGGCCCGTCGCTGACCTTGGCCGGCAGTCTGCTTGT
GCTGGAGCTGCTGACCGCGCTGCCCATTGCCGTCGCCGTCGCTTATTTCCGCGGCACGCTGACCGACCGCCTGGTCACCA
TGATCTGCACGGTGGCGATGTCGGTGAGCTCCCTGGTCTACATCATCGTCGGCCAATACCAGCTTGCTTTCGTGATGGAC
CTGTTCCCGGTGATGGGCTGGGACGACAACAGCCTGGCCACCAATTTGCTGGTCTACCTGCCGCTGCCGCTGATCCTGGG
CATTCTGGTGGCGCTGGCGCCCAGCGTGCGCTTCTACCGCAGCTTTGTGGTGGAAGAGCTGAACCACGACTACGTGCGCA
CCGCGCGCGCCAAGGGCCTGTCCGAGCCCAAGGTGCTGTTCAAGCACGTGCTGCGCAACGCGCTGATCCCGGTCGTCACC
AACATCACCATGTCGCTGCCTTTCCTGATGCTGGGCTCCATGCTGCTGGAGCGTTTCTTCGGCATTCCCGGCATGGGCAA
CGAGCTGCTGAACGCGGTGGATAAGAGCGACTTCCCGGTGATCAAGGCGATCACCATCACTATCGCCGCCGCGGCCATGG
TGTTCAACCTGCTGGCGGATGTCCTGTACAAGTGGATCGATCCGCGCGTCCAGCTGAAGTAA

Upstream 100 bases:

>100_bases
CTATACGATCGGCGGCTTCTGGCGCTACGTCGACATCGCCCGGCATTGAGTCCCATCTAGTTCGTTTCCGCCGGATGGCC
GGACGGAGCAAGGAAAAAAC

Downstream 100 bases:

>100_bases
GGGGAGAGAGACGATGACGACATTGCAGAATACCGCCGGCGCCGCGCCGGCCGCCGTCCCGTCCCGCAGCCTGTGGGCGC
TGGGCTGGCAACGCTTGAAG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MFAFIIRRLWQMIPTMLGVMLLVFVLFNWVGGDPTFILEGKRLTPEMLANIRVQLGLDKSLPEQFLLFVKQVFTYDFGNS
WATQQSVSGTLANRVGPSLTLAGSLLVLELLTALPIAVAVAYFRGTLTDRLVTMICTVAMSVSSLVYIIVGQYQLAFVMD
LFPVMGWDDNSLATNLLVYLPLPLILGILVALAPSVRFYRSFVVEELNHDYVRTARAKGLSEPKVLFKHVLRNALIPVVT
NITMSLPFLMLGSMLLERFFGIPGMGNELLNAVDKSDFPVIKAITITIAAAAMVFNLLADVLYKWIDPRVQLK

Sequences:

>Translated_313_residues
MFAFIIRRLWQMIPTMLGVMLLVFVLFNWVGGDPTFILEGKRLTPEMLANIRVQLGLDKSLPEQFLLFVKQVFTYDFGNS
WATQQSVSGTLANRVGPSLTLAGSLLVLELLTALPIAVAVAYFRGTLTDRLVTMICTVAMSVSSLVYIIVGQYQLAFVMD
LFPVMGWDDNSLATNLLVYLPLPLILGILVALAPSVRFYRSFVVEELNHDYVRTARAKGLSEPKVLFKHVLRNALIPVVT
NITMSLPFLMLGSMLLERFFGIPGMGNELLNAVDKSDFPVIKAITITIAAAAMVFNLLADVLYKWIDPRVQLK
>Mature_313_residues
MFAFIIRRLWQMIPTMLGVMLLVFVLFNWVGGDPTFILEGKRLTPEMLANIRVQLGLDKSLPEQFLLFVKQVFTYDFGNS
WATQQSVSGTLANRVGPSLTLAGSLLVLELLTALPIAVAVAYFRGTLTDRLVTMICTVAMSVSSLVYIIVGQYQLAFVMD
LFPVMGWDDNSLATNLLVYLPLPLILGILVALAPSVRFYRSFVVEELNHDYVRTARAKGLSEPKVLFKHVLRNALIPVVT
NITMSLPFLMLGSMLLERFFGIPGMGNELLNAVDKSDFPVIKAITITIAAAAMVFNLLADVLYKWIDPRVQLK

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=314, Percent_Identity=35.031847133758, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=31.3609467455621, Blast_Score=168, Evalue=3e-43,
Organism=Escherichia coli, GI1789888, Length=318, Percent_Identity=30.8176100628931, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1787497, Length=313, Percent_Identity=28.4345047923323, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1787761, Length=331, Percent_Identity=30.5135951661631, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1788504, Length=290, Percent_Identity=25.8620689655172, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787550, Length=276, Percent_Identity=21.7391304347826, Blast_Score=78, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34851; Mature: 34851

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCCCC
>Mature Secondary Structure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HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA