Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34498031

Identifier: 34498031

GI number: 34498031

Start: 2780094

End: 2780849

Strand: Reverse

Name: 34498031

Synonym: CV_2576

Alternate gene names: NA

Gene position: 2780849-2780094 (Counterclockwise)

Preceding gene: 34498032

Following gene: 34498030

Centisome position: 58.53

GC content: 58.6

Gene sequence:

>756_bases
ATGACGGATTTTTCGGTGGCTAGATTTAGCCAGAGTACAGGTGCGAATGGCGTCCCCGGGGAGTATTCCGTCAACTCGAA
AAAAACCGGCGAACTACCCAAACTGCCAGAGTTGCAAATCGGCGCCGATCCATTGCACAACGTTCTCAATGACCTGAAGT
CGCTTGATTTCGAGTCTTGCGGCCTGGAAGCGCCGATCCCGGATGGCCTCAACTACACGGTGCAGTTGCTGGCCGGCAAC
GAGGGCTTCGGGGCGCTGGACTTGCATGGCACGTTCAGCATCGGTGATCTGATGGCCAAGCTGCAAAGTTTGTATGGCCA
GCAGCGCGAAGGTTTTTGGGCGATGCAGGCGGAGTTGCTGCCCTTGGTTGCTGCTGTCGCGCTGCTTGCAGTTCAGCAGC
GCAGCGAGGCGGCGGAGCTCAATGCCCGGGCGCTGCAGGAAAACGCGGCGAGCGAGGTGGTTGGAGGCGCCGGCCAAGTG
TTCTCCGCGGTTGGGGGAGAAACAGCTAGAGCAGTAGCGAGCAAAGGCGCGGCGCAAATCAGTGAAGCTATCTCCCTTCA
TGCCGTGGGCCATGAAGTGCAAGGCGCGCAGGAGGAAACGTCGGGAGAGTTGGCCCAGAAGCTGGCAAACAGTATCGGCC
AACATCTGGCCAATGATGCCCGACAGGAAACTGCGAATCGGCAGGAGTATATCCCATTGATGGAGGGGATGATCGCTGTG
TTAGCTAAGGATGGCCAAAGCTGGGTTCGCCGGTGA

Upstream 100 bases:

>100_bases
ACAGCAAGAGCCAGGTGATCGATGACGGCCTCCAGGCGATGAGCCAGGCAGCTTCCACCCAGGCGCAGATCGCGTCTTCC
ATGGTGTAGAGGGGAGAGAG

Downstream 100 bases:

>100_bases
AGCACAAGCAGTGAAATCAATTATCGTGACACCACAAAGTGGCACGCAACATTTGTTTAGGAAAGTTATCATGATGGATA
TTAACAAAGTTGGAGTCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MTDFSVARFSQSTGANGVPGEYSVNSKKTGELPKLPELQIGADPLHNVLNDLKSLDFESCGLEAPIPDGLNYTVQLLAGN
EGFGALDLHGTFSIGDLMAKLQSLYGQQREGFWAMQAELLPLVAAVALLAVQQRSEAAELNARALQENAASEVVGGAGQV
FSAVGGETARAVASKGAAQISEAISLHAVGHEVQGAQEETSGELAQKLANSIGQHLANDARQETANRQEYIPLMEGMIAV
LAKDGQSWVRR

Sequences:

>Translated_251_residues
MTDFSVARFSQSTGANGVPGEYSVNSKKTGELPKLPELQIGADPLHNVLNDLKSLDFESCGLEAPIPDGLNYTVQLLAGN
EGFGALDLHGTFSIGDLMAKLQSLYGQQREGFWAMQAELLPLVAAVALLAVQQRSEAAELNARALQENAASEVVGGAGQV
FSAVGGETARAVASKGAAQISEAISLHAVGHEVQGAQEETSGELAQKLANSIGQHLANDARQETANRQEYIPLMEGMIAV
LAKDGQSWVRR
>Mature_250_residues
TDFSVARFSQSTGANGVPGEYSVNSKKTGELPKLPELQIGADPLHNVLNDLKSLDFESCGLEAPIPDGLNYTVQLLAGNE
GFGALDLHGTFSIGDLMAKLQSLYGQQREGFWAMQAELLPLVAAVALLAVQQRSEAAELNARALQENAASEVVGGAGQVF
SAVGGETARAVASKGAAQISEAISLHAVGHEVQGAQEETSGELAQKLANSIGQHLANDARQETANRQEYIPLMEGMIAVL
AKDGQSWVRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26454; Mature: 26323

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFSVARFSQSTGANGVPGEYSVNSKKTGELPKLPELQIGADPLHNVLNDLKSLDFESC
CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHC
GLEAPIPDGLNYTVQLLAGNEGFGALDLHGTFSIGDLMAKLQSLYGQQREGFWAMQAELL
CCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHCHHHCCHHHHHHHHH
PLVAAVALLAVQQRSEAAELNARALQENAASEVVGGAGQVFSAVGGETARAVASKGAAQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHH
SEAISLHAVGHEVQGAQEETSGELAQKLANSIGQHLANDARQETANRQEYIPLMEGMIAV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LAKDGQSWVRR
HHHCCHHHHCC
>Mature Secondary Structure 
TDFSVARFSQSTGANGVPGEYSVNSKKTGELPKLPELQIGADPLHNVLNDLKSLDFESC
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHC
GLEAPIPDGLNYTVQLLAGNEGFGALDLHGTFSIGDLMAKLQSLYGQQREGFWAMQAELL
CCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHCHHHCCHHHHHHHHH
PLVAAVALLAVQQRSEAAELNARALQENAASEVVGGAGQVFSAVGGETARAVASKGAAQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHH
SEAISLHAVGHEVQGAQEETSGELAQKLANSIGQHLANDARQETANRQEYIPLMEGMIAV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LAKDGQSWVRR
HHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA