| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498031
Identifier: 34498031
GI number: 34498031
Start: 2780094
End: 2780849
Strand: Reverse
Name: 34498031
Synonym: CV_2576
Alternate gene names: NA
Gene position: 2780849-2780094 (Counterclockwise)
Preceding gene: 34498032
Following gene: 34498030
Centisome position: 58.53
GC content: 58.6
Gene sequence:
>756_bases ATGACGGATTTTTCGGTGGCTAGATTTAGCCAGAGTACAGGTGCGAATGGCGTCCCCGGGGAGTATTCCGTCAACTCGAA AAAAACCGGCGAACTACCCAAACTGCCAGAGTTGCAAATCGGCGCCGATCCATTGCACAACGTTCTCAATGACCTGAAGT CGCTTGATTTCGAGTCTTGCGGCCTGGAAGCGCCGATCCCGGATGGCCTCAACTACACGGTGCAGTTGCTGGCCGGCAAC GAGGGCTTCGGGGCGCTGGACTTGCATGGCACGTTCAGCATCGGTGATCTGATGGCCAAGCTGCAAAGTTTGTATGGCCA GCAGCGCGAAGGTTTTTGGGCGATGCAGGCGGAGTTGCTGCCCTTGGTTGCTGCTGTCGCGCTGCTTGCAGTTCAGCAGC GCAGCGAGGCGGCGGAGCTCAATGCCCGGGCGCTGCAGGAAAACGCGGCGAGCGAGGTGGTTGGAGGCGCCGGCCAAGTG TTCTCCGCGGTTGGGGGAGAAACAGCTAGAGCAGTAGCGAGCAAAGGCGCGGCGCAAATCAGTGAAGCTATCTCCCTTCA TGCCGTGGGCCATGAAGTGCAAGGCGCGCAGGAGGAAACGTCGGGAGAGTTGGCCCAGAAGCTGGCAAACAGTATCGGCC AACATCTGGCCAATGATGCCCGACAGGAAACTGCGAATCGGCAGGAGTATATCCCATTGATGGAGGGGATGATCGCTGTG TTAGCTAAGGATGGCCAAAGCTGGGTTCGCCGGTGA
Upstream 100 bases:
>100_bases ACAGCAAGAGCCAGGTGATCGATGACGGCCTCCAGGCGATGAGCCAGGCAGCTTCCACCCAGGCGCAGATCGCGTCTTCC ATGGTGTAGAGGGGAGAGAG
Downstream 100 bases:
>100_bases AGCACAAGCAGTGAAATCAATTATCGTGACACCACAAAGTGGCACGCAACATTTGTTTAGGAAAGTTATCATGATGGATA TTAACAAAGTTGGAGTCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MTDFSVARFSQSTGANGVPGEYSVNSKKTGELPKLPELQIGADPLHNVLNDLKSLDFESCGLEAPIPDGLNYTVQLLAGN EGFGALDLHGTFSIGDLMAKLQSLYGQQREGFWAMQAELLPLVAAVALLAVQQRSEAAELNARALQENAASEVVGGAGQV FSAVGGETARAVASKGAAQISEAISLHAVGHEVQGAQEETSGELAQKLANSIGQHLANDARQETANRQEYIPLMEGMIAV LAKDGQSWVRR
Sequences:
>Translated_251_residues MTDFSVARFSQSTGANGVPGEYSVNSKKTGELPKLPELQIGADPLHNVLNDLKSLDFESCGLEAPIPDGLNYTVQLLAGN EGFGALDLHGTFSIGDLMAKLQSLYGQQREGFWAMQAELLPLVAAVALLAVQQRSEAAELNARALQENAASEVVGGAGQV FSAVGGETARAVASKGAAQISEAISLHAVGHEVQGAQEETSGELAQKLANSIGQHLANDARQETANRQEYIPLMEGMIAV LAKDGQSWVRR >Mature_250_residues TDFSVARFSQSTGANGVPGEYSVNSKKTGELPKLPELQIGADPLHNVLNDLKSLDFESCGLEAPIPDGLNYTVQLLAGNE GFGALDLHGTFSIGDLMAKLQSLYGQQREGFWAMQAELLPLVAAVALLAVQQRSEAAELNARALQENAASEVVGGAGQVF SAVGGETARAVASKGAAQISEAISLHAVGHEVQGAQEETSGELAQKLANSIGQHLANDARQETANRQEYIPLMEGMIAVL AKDGQSWVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26454; Mature: 26323
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDFSVARFSQSTGANGVPGEYSVNSKKTGELPKLPELQIGADPLHNVLNDLKSLDFESC CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHC GLEAPIPDGLNYTVQLLAGNEGFGALDLHGTFSIGDLMAKLQSLYGQQREGFWAMQAELL CCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHCHHHCCHHHHHHHHH PLVAAVALLAVQQRSEAAELNARALQENAASEVVGGAGQVFSAVGGETARAVASKGAAQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHH SEAISLHAVGHEVQGAQEETSGELAQKLANSIGQHLANDARQETANRQEYIPLMEGMIAV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LAKDGQSWVRR HHHCCHHHHCC >Mature Secondary Structure TDFSVARFSQSTGANGVPGEYSVNSKKTGELPKLPELQIGADPLHNVLNDLKSLDFESC CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHC GLEAPIPDGLNYTVQLLAGNEGFGALDLHGTFSIGDLMAKLQSLYGQQREGFWAMQAELL CCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHCHHHCCHHHHHHHHH PLVAAVALLAVQQRSEAAELNARALQENAASEVVGGAGQVFSAVGGETARAVASKGAAQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHH SEAISLHAVGHEVQGAQEETSGELAQKLANSIGQHLANDARQETANRQEYIPLMEGMIAV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LAKDGQSWVRR HHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA