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The map label for this gene is sseE

Identifier: 34498029

GI number: 34498029

Start: 2778934

End: 2779362

Strand: Reverse

Name: sseE

Synonym: CV_2574

Alternate gene names: NA

Gene position: 2779362-2778934 (Counterclockwise)

Preceding gene: 34498030

Following gene: 34498027

Centisome position: 58.5

GC content: 51.75

Gene sequence:

>429_bases
ATGCAAGAAATGAATATCAAACCGGATGTCGTTACGCAATTTCTGCTGTCGCAGGGTTTAGTGCCAGAGGCAGAATATTT
TGGCAACAGCCATGTTTTGGTCGGACAGCGAGTCAAACTGCTGGATTGCGAACTGGTTTATCGCCTGGAGGATGAGGAAT
TGATTATTTGCGACTTCGTCGCCAAGCAGCCGGTACAAGGTTCCGCCAGCGCCGTTGCGGCTTTTATCCATCTGATCCAT
AAAATTGAAAAATCGGTTCCGACAGTGAAGCGGGTGAGAGGGCTGTTTTTGGAAAGCATGACTCGGCCAGAGCTGAATCA
GATCCGGATGAGGCTGTCCAAAGTTCTGGAGGCGCAGGGTGCCACGTGGCGCGACATCGATGGCGAGTTGTGGCTGGTCT
ATGAAATCGGACTGGCTCAGGCGGTGTAG

Upstream 100 bases:

>100_bases
AGCATGCAAGAGCGAATGATGTCGGTCGTCAAAATTTAACTCCACTTATGAATCGTGAGCGGATATGGGTTTTCCCATAT
CCGCCGAATGGAGAGTCGAA

Downstream 100 bases:

>100_bases
CGAATCTACAGCTGACGTGAGTGCCTCAGAAACCGGGACTGCTGGTATCGCGCATCGACTTCCGCAGAACCCGGGCCATG
AGGGGGCTCGCGTCCATGCA

Product: secretion system effector SseE

Products: NA

Alternate protein names: Type III Secretion System Effector Protein E

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MQEMNIKPDVVTQFLLSQGLVPEAEYFGNSHVLVGQRVKLLDCELVYRLEDEELIICDFVAKQPVQGSASAVAAFIHLIH
KIEKSVPTVKRVRGLFLESMTRPELNQIRMRLSKVLEAQGATWRDIDGELWLVYEIGLAQAV

Sequences:

>Translated_142_residues
MQEMNIKPDVVTQFLLSQGLVPEAEYFGNSHVLVGQRVKLLDCELVYRLEDEELIICDFVAKQPVQGSASAVAAFIHLIH
KIEKSVPTVKRVRGLFLESMTRPELNQIRMRLSKVLEAQGATWRDIDGELWLVYEIGLAQAV
>Mature_142_residues
MQEMNIKPDVVTQFLLSQGLVPEAEYFGNSHVLVGQRVKLLDCELVYRLEDEELIICDFVAKQPVQGSASAVAAFIHLIH
KIEKSVPTVKRVRGLFLESMTRPELNQIRMRLSKVLEAQGATWRDIDGELWLVYEIGLAQAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16078; Mature: 16078

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEMNIKPDVVTQFLLSQGLVPEAEYFGNSHVLVGQRVKLLDCELVYRLEDEELIICDFV
CCCCCCCHHHHHHHHHHCCCCCCHHHCCCCEEEECCCEEEECCEEEEEECCCCEEEEEHH
AKQPVQGSASAVAAFIHLIHKIEKSVPTVKRVRGLFLESMTRPELNQIRMRLSKVLEAQG
HCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
ATWRDIDGELWLVYEIGLAQAV
CEEEECCCCEEEEEECCHHHCC
>Mature Secondary Structure
MQEMNIKPDVVTQFLLSQGLVPEAEYFGNSHVLVGQRVKLLDCELVYRLEDEELIICDFV
CCCCCCCHHHHHHHHHHCCCCCCHHHCCCCEEEECCCEEEECCEEEEEECCCCEEEEEHH
AKQPVQGSASAVAAFIHLIHKIEKSVPTVKRVRGLFLESMTRPELNQIRMRLSKVLEAQG
HCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
ATWRDIDGELWLVYEIGLAQAV
CEEEECCCCEEEEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA