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The map label for this gene is codB [H]

Identifier: 34498027

GI number: 34498027

Start: 2774370

End: 2775716

Strand: Reverse

Name: codB [H]

Synonym: CV_2572

Alternate gene names: 34498027

Gene position: 2775716-2774370 (Counterclockwise)

Preceding gene: 34498029

Following gene: 34498023

Centisome position: 58.42

GC content: 69.49

Gene sequence:

>1347_bases
ATGAAAGCGAAAACGCCCGCAAGCTCGTCGTTGATCGAGCGCCGTTCCATAGACTTCATCCCCGAAAGCGAGCGGCATGG
CCGCGTATTCAGCCAGTTCACCTTGTGGCTGGCGGCCAATCTGCAGATCACCGCCGTCGTCACCGGCGCGCTGGCCGTGG
CGCTGGGTGGCGACATCGTCTGGTCCATCGCCGGCTTGCTGTTGGGGCAGATCGCCGGCGGCGCGGTAATGGCGCTGCAC
GGCGCGCAGGGCCCCCGGCTGGGCTTGCCGCAGATGTTGGCCTGCCGCGCGCAGTTTGGCGTCAAGGGCGCGGTGCTGCC
GCTGGCGCTGGCCTGCGTCATGTACCTGGGCTTCAACGCCACCGGCATGGTGTTGTCCGGCCAGGCGCTGGGCCAGTTGC
TGCAGCTGAGCGACGCTGCGGGGAGCCTGCTGTTCGCGCTGGCGGTGCTGCTGGCCGCGGCGCTCGGCTACCGGGCGATA
CACCGGCTGGGGCGGGTGGATCTGCTGCCGTTGCTGGCGGAGCATGCCCGTTTCGAGCCGGCCGCCTTCGTCACGGCGAT
ATCGTTGTCCGCGTCCTGGCAAATCGCTTTCGCGCCCTACGTGTCCGATTATTCGCGCTACCTGCCGTCGGCCACGCCGC
CGGCGCGGGTGGCGTGGGCGATAGGCTTGGGCTCAACGCTGGGGGCGCAGATCGCGATGTCGCTGGGCGTGCTGGTGGCG
GCCATCGGCGGCGCGGCCTTCCGCGGGCACGAGGTCGCCTATTTCGTCGGCCTGGGCGCCGACGGCGCCATCGCCGCCGC
GCTGTTCTTCTGCGTGGCTTTCGGCAAGGTCACGATTTCCACGCTCAACGCTTACGGCGGCTTCATGTGTGCGGGTGGCA
TCGCCTCGGCGTTCGGCGCGCGCCCGGAGGCGCTGGGGCCGCGCCGGCGCTGGCTGATCGTCGCTTGCATGGTTTTGGTC
TCGCTAGGGATCGCGGTCTGGGCGCAGCAAGGCTTCCTGCCGCTGTTCAAGTCTTTCCTGTTGCTGCTGCTGGCGCTGTT
CACGCCGTGGAGCGCGGTGAACCTGGCGGATTTTTACCTGTTGCGGGGCGGGAGGGTGGACTTGGCGACGTTGGAAGGAG
CCGATTACCGTTGGCCGGGGCTGCTGGCTTACCTGGCGGGCGTGCTGTTGCAGCTGCCCTTCATCGACAGCGCCCTGTTC
AGCGGACCCATGGTCCGCGTGCTGGGCGGCGCCGACGTTTCCTGGCTGGCAGGCTGGCTGGGCGCGGCCGGCCTTTACTG
GCTGATGATGCGCCGGGGCGCGGCCGCGTGGGCGGCCGTCCCCGGCGGAGGGCGAAGCGCCGGCTAG

Upstream 100 bases:

>100_bases
ATTTGCGGACGAGAATGCCAAAAGTATAAATTGGTCCGGCCGTTCCGGCCGGCGCCGCGGCAAGACGGCGCGCTGGGGCG
CAGACAAAGGAGAACACGCC

Downstream 100 bases:

>100_bases
GCGTTTACCATGGCCGCGCCGATGACGGGCAGGGCGGCACCACCGGCGCGTTGCTGCCGGTGTCGATGAAGCCGTCGCTG
ATCCAGTGGCCGGAGGCGGT

Product: purine cytosine permease-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MKAKTPASSSLIERRSIDFIPESERHGRVFSQFTLWLAANLQITAVVTGALAVALGGDIVWSIAGLLLGQIAGGAVMALH
GAQGPRLGLPQMLACRAQFGVKGAVLPLALACVMYLGFNATGMVLSGQALGQLLQLSDAAGSLLFALAVLLAAALGYRAI
HRLGRVDLLPLLAEHARFEPAAFVTAISLSASWQIAFAPYVSDYSRYLPSATPPARVAWAIGLGSTLGAQIAMSLGVLVA
AIGGAAFRGHEVAYFVGLGADGAIAAALFFCVAFGKVTISTLNAYGGFMCAGGIASAFGARPEALGPRRRWLIVACMVLV
SLGIAVWAQQGFLPLFKSFLLLLLALFTPWSAVNLADFYLLRGGRVDLATLEGADYRWPGLLAYLAGVLLQLPFIDSALF
SGPMVRVLGGADVSWLAGWLGAAGLYWLMMRRGAAAWAAVPGGGRSAG

Sequences:

>Translated_448_residues
MKAKTPASSSLIERRSIDFIPESERHGRVFSQFTLWLAANLQITAVVTGALAVALGGDIVWSIAGLLLGQIAGGAVMALH
GAQGPRLGLPQMLACRAQFGVKGAVLPLALACVMYLGFNATGMVLSGQALGQLLQLSDAAGSLLFALAVLLAAALGYRAI
HRLGRVDLLPLLAEHARFEPAAFVTAISLSASWQIAFAPYVSDYSRYLPSATPPARVAWAIGLGSTLGAQIAMSLGVLVA
AIGGAAFRGHEVAYFVGLGADGAIAAALFFCVAFGKVTISTLNAYGGFMCAGGIASAFGARPEALGPRRRWLIVACMVLV
SLGIAVWAQQGFLPLFKSFLLLLLALFTPWSAVNLADFYLLRGGRVDLATLEGADYRWPGLLAYLAGVLLQLPFIDSALF
SGPMVRVLGGADVSWLAGWLGAAGLYWLMMRRGAAAWAAVPGGGRSAG
>Mature_448_residues
MKAKTPASSSLIERRSIDFIPESERHGRVFSQFTLWLAANLQITAVVTGALAVALGGDIVWSIAGLLLGQIAGGAVMALH
GAQGPRLGLPQMLACRAQFGVKGAVLPLALACVMYLGFNATGMVLSGQALGQLLQLSDAAGSLLFALAVLLAAALGYRAI
HRLGRVDLLPLLAEHARFEPAAFVTAISLSASWQIAFAPYVSDYSRYLPSATPPARVAWAIGLGSTLGAQIAMSLGVLVA
AIGGAAFRGHEVAYFVGLGADGAIAAALFFCVAFGKVTISTLNAYGGFMCAGGIASAFGARPEALGPRRRWLIVACMVLV
SLGIAVWAQQGFLPLFKSFLLLLLALFTPWSAVNLADFYLLRGGRVDLATLEGADYRWPGLLAYLAGVLLQLPFIDSALF
SGPMVRVLGGADVSWLAGWLGAAGLYWLMMRRGAAAWAAVPGGGRSAG

Specific function: Transport Of Allantoin (By Similarity). [C]

COG id: COG1457

COG function: function code F; Purine-cytosine permease and related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the purine-cytosine permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001248 [H]

Pfam domain/function: PF02133 Transp_cyt_pur [H]

EC number: NA

Molecular weight: Translated: 46606; Mature: 46606

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKTPASSSLIERRSIDFIPESERHGRVFSQFTLWLAANLQITAVVTGALAVALGGDIV
CCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHCHHHH
WSIAGLLLGQIAGGAVMALHGAQGPRLGLPQMLACRAQFGVKGAVLPLALACVMYLGFNA
HHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
TGMVLSGQALGQLLQLSDAAGSLLFALAVLLAAALGYRAIHRLGRVDLLPLLAEHARFEP
CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
AAFVTAISLSASWQIAFAPYVSDYSRYLPSATPPARVAWAIGLGSTLGAQIAMSLGVLVA
HHHHEEEEECCCEEEEECHHHHHHHHHCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHH
AIGGAAFRGHEVAYFVGLGADGAIAAALFFCVAFGKVTISTLNAYGGFMCAGGIASAFGA
HHCCHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
RPEALGPRRRWLIVACMVLVSLGIAVWAQQGFLPLFKSFLLLLLALFTPWSAVNLADFYL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHE
LRGGRVDLATLEGADYRWPGLLAYLAGVLLQLPFIDSALFSGPMVRVLGGADVSWLAGWL
ECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH
GAAGLYWLMMRRGAAAWAAVPGGGRSAG
HHHHHHHHHHHCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MKAKTPASSSLIERRSIDFIPESERHGRVFSQFTLWLAANLQITAVVTGALAVALGGDIV
CCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHCHHHH
WSIAGLLLGQIAGGAVMALHGAQGPRLGLPQMLACRAQFGVKGAVLPLALACVMYLGFNA
HHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
TGMVLSGQALGQLLQLSDAAGSLLFALAVLLAAALGYRAIHRLGRVDLLPLLAEHARFEP
CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
AAFVTAISLSASWQIAFAPYVSDYSRYLPSATPPARVAWAIGLGSTLGAQIAMSLGVLVA
HHHHEEEEECCCEEEEECHHHHHHHHHCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHH
AIGGAAFRGHEVAYFVGLGADGAIAAALFFCVAFGKVTISTLNAYGGFMCAGGIASAFGA
HHCCHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
RPEALGPRRRWLIVACMVLVSLGIAVWAQQGFLPLFKSFLLLLLALFTPWSAVNLADFYL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHE
LRGGRVDLATLEGADYRWPGLLAYLAGVLLQLPFIDSALFSGPMVRVLGGADVSWLAGWL
ECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH
GAAGLYWLMMRRGAAAWAAVPGGGRSAG
HHHHHHHHHHHCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]