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The map label for this gene is pqiB [H]

Identifier: 34498002

GI number: 34498002

Start: 2740350

End: 2741969

Strand: Reverse

Name: pqiB [H]

Synonym: CV_2547

Alternate gene names: 34498002

Gene position: 2741969-2740350 (Counterclockwise)

Preceding gene: 34498003

Following gene: 34498001

Centisome position: 57.71

GC content: 68.58

Gene sequence:

>1620_bases
ATGAGCAGTGACAATCCACAAAAACCGGAGCAGGACGATCTGCCGCAGGCGGTGCCGGTGCGCCGCCGTCGCTGGGCGCC
GTCGCTGGTCTGGCTGATCCCGGTGGTGGCGGCGCTGATAGGCGGCTGGCTGGCGGTGCACGCCGTGCTGTCGCGCGGCC
CCACCATCACCATCTCCTTCCAGAACGCCGAGGGGATAGAGGCCGGCAAGACCCGGATCAAGTACAAGGACGTGGAAATC
GGCGAGGTGACCTCGGTCAAGCTCAGCCCCAACCGGCAGGCCATCGTCGCCACCGCGCAACTGAGCAAGGAGGCGGCCGA
CTACCTGGCGGAGGACAGCCGCTTCTGGGTGGTGCGGCCGCGCGTGTCCGGCGGCGGCGTGTCCGGCCTGGGCACGGTGC
TGTCCGGTTCCTACATCGGCATGGACATCGGCAAGAGCGAGGCGCGCAAGACCGACTTTGTCGGCCTGGAAACCCCGCCC
ATCATCAACGCCGACCTGCCCGGCCAGACCTTCACGCTGCGCGCAGACAACCTGGGCTCGCTGAACACCGGCTCGCCGGT
GTATTTCCGCCGGGTGCCGGTGGGGCAGGTGGTCGGCTACGAGCTGGACTCCAAGGGCGGCTACGTCAAGGTCGCCGTCT
TCATCAACGCGCCGTACGACCGTTTCGTGTCCGCCAACAGCCGCTTCTGGCACGCCAGCGGAGTCGACGTGTCGCTGAGC
GCCAACGGCCTCAACGTCAGCACCCAGTCGCTGGCGGCGATCGCGCTGGGCGGCATCGCTTTCGAGACGCCGCTGGCCGA
CAACGCCGGCATCCCGCTGTCCGACCGCAACTTCATCCTGCACGACAGCCGCGACAGGGCGCTGCAGAACCCGGACCGCG
AGATGCAGCCGTTCCGCCTGCGTTTCCGCCAGTCGCTGCGCGGCCTGAGCGTCGGCGCGCCGGTGGACTTCCGCGGCATC
ACCATAGGCGAGGTGACGGCGATAGGCGTGCAGTACGTGCCGGAACGCAAAGATTTCGACATGACGGTGGACATCCGCAC
CTATCCCAGCCGGCTGGACAGCCTGTCGCGCGGCGGCCGCATCAGCGGCAAGCTGTCGCCGCAGGCGCTGGTGGCCAACG
GCATGCGCGCCCAGCTGCGCTCCGGCAATCTGATCACCGGCCAGCTCTACGTGGCGCTGGACTTCTTCCGCGACGCGCCG
CCGGCCAAGCTGGTCGTGCGCAACGGCCTGCCCGAGCTGCCGACCATTTCGGGCGACCTGGAGGAGCTGCAGCGGGTGCT
GCAGCGCATCGTCAAGAAACTGGACGCGGTGCCGTTCGACAGCATAGGCAAGGAGGCCGACGCCTCGCTGAAATCGCTGC
ACCAGACGCTGGACAGCGTGAAGAAGCTGTCCGACGGCCTGAACGGCGACGCGGTGCCCCAGACGCTGAAGACGCTGGAG
CAGCTGCAGCAGACGCTGGAGGCCACCCGCCAGGCCATGCGCGCCGATTCGCCGCTGCAGCAGGACGTGCGCGCCGCCGC
GCAGGAAGTGAAGGAGACCGCGCGCAGCTTCCGCGCGCTGGCCGATTACCTGGACCGCCATCCCGAGGCGCTGGTGCGCG
GCAAGGAGGCTCAACCATGA

Upstream 100 bases:

>100_bases
GGGCCGGGGGCGATCGCCTTCGGCGCGGTGGTGGTGCTGACCATGCTGGCCGCGATGAGTTTCGATCCCAGGATGATCTG
GGATCCGGTAGAGGAACACG

Downstream 100 bases:

>100_bases
TCAGACATTGGATTCCCGCCGTTTTTCTGGCCGCCGCGCTGGCGGGCTGCGCGTCGCCGCAGTCCCGTTTCTACGGCCTG
GACGCGCCGGCCGCGCCGCA

Product: paraquat-inducible protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MSSDNPQKPEQDDLPQAVPVRRRRWAPSLVWLIPVVAALIGGWLAVHAVLSRGPTITISFQNAEGIEAGKTRIKYKDVEI
GEVTSVKLSPNRQAIVATAQLSKEAADYLAEDSRFWVVRPRVSGGGVSGLGTVLSGSYIGMDIGKSEARKTDFVGLETPP
IINADLPGQTFTLRADNLGSLNTGSPVYFRRVPVGQVVGYELDSKGGYVKVAVFINAPYDRFVSANSRFWHASGVDVSLS
ANGLNVSTQSLAAIALGGIAFETPLADNAGIPLSDRNFILHDSRDRALQNPDREMQPFRLRFRQSLRGLSVGAPVDFRGI
TIGEVTAIGVQYVPERKDFDMTVDIRTYPSRLDSLSRGGRISGKLSPQALVANGMRAQLRSGNLITGQLYVALDFFRDAP
PAKLVVRNGLPELPTISGDLEELQRVLQRIVKKLDAVPFDSIGKEADASLKSLHQTLDSVKKLSDGLNGDAVPQTLKTLE
QLQQTLEATRQAMRADSPLQQDVRAAAQEVKETARSFRALADYLDRHPEALVRGKEAQP

Sequences:

>Translated_539_residues
MSSDNPQKPEQDDLPQAVPVRRRRWAPSLVWLIPVVAALIGGWLAVHAVLSRGPTITISFQNAEGIEAGKTRIKYKDVEI
GEVTSVKLSPNRQAIVATAQLSKEAADYLAEDSRFWVVRPRVSGGGVSGLGTVLSGSYIGMDIGKSEARKTDFVGLETPP
IINADLPGQTFTLRADNLGSLNTGSPVYFRRVPVGQVVGYELDSKGGYVKVAVFINAPYDRFVSANSRFWHASGVDVSLS
ANGLNVSTQSLAAIALGGIAFETPLADNAGIPLSDRNFILHDSRDRALQNPDREMQPFRLRFRQSLRGLSVGAPVDFRGI
TIGEVTAIGVQYVPERKDFDMTVDIRTYPSRLDSLSRGGRISGKLSPQALVANGMRAQLRSGNLITGQLYVALDFFRDAP
PAKLVVRNGLPELPTISGDLEELQRVLQRIVKKLDAVPFDSIGKEADASLKSLHQTLDSVKKLSDGLNGDAVPQTLKTLE
QLQQTLEATRQAMRADSPLQQDVRAAAQEVKETARSFRALADYLDRHPEALVRGKEAQP
>Mature_538_residues
SSDNPQKPEQDDLPQAVPVRRRRWAPSLVWLIPVVAALIGGWLAVHAVLSRGPTITISFQNAEGIEAGKTRIKYKDVEIG
EVTSVKLSPNRQAIVATAQLSKEAADYLAEDSRFWVVRPRVSGGGVSGLGTVLSGSYIGMDIGKSEARKTDFVGLETPPI
INADLPGQTFTLRADNLGSLNTGSPVYFRRVPVGQVVGYELDSKGGYVKVAVFINAPYDRFVSANSRFWHASGVDVSLSA
NGLNVSTQSLAAIALGGIAFETPLADNAGIPLSDRNFILHDSRDRALQNPDREMQPFRLRFRQSLRGLSVGAPVDFRGIT
IGEVTAIGVQYVPERKDFDMTVDIRTYPSRLDSLSRGGRISGKLSPQALVANGMRAQLRSGNLITGQLYVALDFFRDAPP
AKLVVRNGLPELPTISGDLEELQRVLQRIVKKLDAVPFDSIGKEADASLKSLHQTLDSVKKLSDGLNGDAVPQTLKTLEQ
LQQTLEATRQAMRADSPLQQDVRAAAQEVKETARSFRALADYLDRHPEALVRGKEAQP

Specific function: Unknown

COG id: COG3008

COG function: function code R; Paraquat-inducible protein B

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiB family [H]

Homologues:

Organism=Escherichia coli, GI1787184, Length=522, Percent_Identity=32.3754789272031, Blast_Score=281, Evalue=7e-77,
Organism=Escherichia coli, GI87081984, Length=243, Percent_Identity=39.917695473251, Blast_Score=181, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 58609; Mature: 58478

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDNPQKPEQDDLPQAVPVRRRRWAPSLVWLIPVVAALIGGWLAVHAVLSRGPTITISF
CCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
QNAEGIEAGKTRIKYKDVEIGEVTSVKLSPNRQAIVATAQLSKEAADYLAEDSRFWVVRP
CCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHCCCEEEEEEE
RVSGGGVSGLGTVLSGSYIGMDIGKSEARKTDFVGLETPPIINADLPGQTFTLRADNLGS
CCCCCCCCHHHHHHCCCEEEEECCCCHHCCCCEECCCCCCEEECCCCCCEEEEECCCCCC
LNTGSPVYFRRVPVGQVVGYELDSKGGYVKVAVFINAPYDRFVSANSRFWHASGVDVSLS
CCCCCCEEEEECCCCHHCCEEECCCCCEEEEEEEEECCHHHHHCCCCCEEEECCCEEEEE
ANGLNVSTQSLAAIALGGIAFETPLADNAGIPLSDRNFILHDSRDRALQNPDREMQPFRL
CCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEEECCHHHHHCCCCCCCCHHHH
RFRQSLRGLSVGAPVDFRGITIGEVTAIGVQYVPERKDFDMTVDIRTYPSRLDSLSRGGR
HHHHHHCCCCCCCCCCCCCEEECCEEEECEEECCCCCCCCEEEEEECCHHHHHHHHCCCC
ISGKLSPQALVANGMRAQLRSGNLITGQLYVALDFFRDAPPAKLVVRNGLPELPTISGDL
CCCCCCHHHHHHCCHHHHHCCCCEEEEEHEEEEEHHCCCCCCEEHEECCCCCCCCCCCCH
EELQRVLQRIVKKLDAVPFDSIGKEADASLKSLHQTLDSVKKLSDGLNGDAVPQTLKTLE
HHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
QLQQTLEATRQAMRADSPLQQDVRAAAQEVKETARSFRALADYLDRHPEALVRGKEAQP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
>Mature Secondary Structure 
SSDNPQKPEQDDLPQAVPVRRRRWAPSLVWLIPVVAALIGGWLAVHAVLSRGPTITISF
CCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
QNAEGIEAGKTRIKYKDVEIGEVTSVKLSPNRQAIVATAQLSKEAADYLAEDSRFWVVRP
CCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHCCCEEEEEEE
RVSGGGVSGLGTVLSGSYIGMDIGKSEARKTDFVGLETPPIINADLPGQTFTLRADNLGS
CCCCCCCCHHHHHHCCCEEEEECCCCHHCCCCEECCCCCCEEECCCCCCEEEEECCCCCC
LNTGSPVYFRRVPVGQVVGYELDSKGGYVKVAVFINAPYDRFVSANSRFWHASGVDVSLS
CCCCCCEEEEECCCCHHCCEEECCCCCEEEEEEEEECCHHHHHCCCCCEEEECCCEEEEE
ANGLNVSTQSLAAIALGGIAFETPLADNAGIPLSDRNFILHDSRDRALQNPDREMQPFRL
CCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEEECCHHHHHCCCCCCCCHHHH
RFRQSLRGLSVGAPVDFRGITIGEVTAIGVQYVPERKDFDMTVDIRTYPSRLDSLSRGGR
HHHHHHCCCCCCCCCCCCCEEECCEEEECEEECCCCCCCCEEEEEECCHHHHHHHHCCCC
ISGKLSPQALVANGMRAQLRSGNLITGQLYVALDFFRDAPPAKLVVRNGLPELPTISGDL
CCCCCCHHHHHHCCHHHHHCCCCEEEEEHEEEEEHHCCCCCCEEHEECCCCCCCCCCCCH
EELQRVLQRIVKKLDAVPFDSIGKEADASLKSLHQTLDSVKKLSDGLNGDAVPQTLKTLE
HHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
QLQQTLEATRQAMRADSPLQQDVRAAAQEVKETARSFRALADYLDRHPEALVRGKEAQP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7751275 [H]