Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is 34498001

Identifier: 34498001

GI number: 34498001

Start: 2739760

End: 2740353

Strand: Reverse

Name: 34498001

Synonym: CV_2546

Alternate gene names: NA

Gene position: 2740353-2739760 (Counterclockwise)

Preceding gene: 34498002

Following gene: 34498000

Centisome position: 57.68

GC content: 73.74

Gene sequence:

>594_bases
ATGATCAGACATTGGATTCCCGCCGTTTTTCTGGCCGCCGCGCTGGCGGGCTGCGCGTCGCCGCAGTCCCGTTTCTACGG
CCTGGACGCGCCGGCCGCGCCGCAGGCGCAGGCCCAGTTCGGCAAGCGGGTGCTGCTGGGGCCGGTGAGCCTGCCCGCGG
CGCTGGATAGGCCGCAACTGGTGCTGGACATGGGCGGCGGCGAGCTGAAACTGCAGGAGTTCGATCGCTGGAGCGCGCCG
CTGGACCGCTTGCTGGCGCAGCGGCTCAGCCTGGGCGTGGCGCGCGCCAGCGGCGTGGCCAGCGTCTACGCTTATCCGCA
GCCGGGCATGGACGGCGGCGAGCTGCGCATCGCCGTAGACGTGCGCGGCCTCAGCCTGAAGCCGGGGCAGGGCGCGGCGC
TGGAGGCGGCCTGGCAGCTGCAGAACGCGGCCGACGGCAGGATACTGGCGCGCGGCGGCTTCAGCCGCAGCCAGCCGGTG
GCGTCGGACCAGCCTGGAGCGCTGCTTGCCGGACTGCAGACGTTGCTGGACGGCCTGGCCGCCGACATCGCCGCGCCGCT
GGCCCAGCACCCGGAATGGTGGCGCGCGGGCTGA

Upstream 100 bases:

>100_bases
CCGCGCAGGAAGTGAAGGAGACCGCGCGCAGCTTCCGCGCGCTGGCCGATTACCTGGACCGCCATCCCGAGGCGCTGGTG
CGCGGCAAGGAGGCTCAACC

Downstream 100 bases:

>100_bases
CTCTCCCCCATTGGGAGTAGCCGGCGCCAGCCGTAAGGGTTAATCCGCCTCGTCCGTTGGCAGACTGACAGTCCTGCGAC
AGACGAATATCGGCGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MIRHWIPAVFLAAALAGCASPQSRFYGLDAPAAPQAQAQFGKRVLLGPVSLPAALDRPQLVLDMGGGELKLQEFDRWSAP
LDRLLAQRLSLGVARASGVASVYAYPQPGMDGGELRIAVDVRGLSLKPGQGAALEAAWQLQNAADGRILARGGFSRSQPV
ASDQPGALLAGLQTLLDGLAADIAAPLAQHPEWWRAG

Sequences:

>Translated_197_residues
MIRHWIPAVFLAAALAGCASPQSRFYGLDAPAAPQAQAQFGKRVLLGPVSLPAALDRPQLVLDMGGGELKLQEFDRWSAP
LDRLLAQRLSLGVARASGVASVYAYPQPGMDGGELRIAVDVRGLSLKPGQGAALEAAWQLQNAADGRILARGGFSRSQPV
ASDQPGALLAGLQTLLDGLAADIAAPLAQHPEWWRAG
>Mature_197_residues
MIRHWIPAVFLAAALAGCASPQSRFYGLDAPAAPQAQAQFGKRVLLGPVSLPAALDRPQLVLDMGGGELKLQEFDRWSAP
LDRLLAQRLSLGVARASGVASVYAYPQPGMDGGELRIAVDVRGLSLKPGQGAALEAAWQLQNAADGRILARGGFSRSQPV
ASDQPGALLAGLQTLLDGLAADIAAPLAQHPEWWRAG

Specific function: Unknown

COG id: COG3009

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20633; Mature: 20633

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRHWIPAVFLAAALAGCASPQSRFYGLDAPAAPQAQAQFGKRVLLGPVSLPAALDRPQL
CCCHHHHHHHHHHHHHHCCCCHHHEECCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCEE
VLDMGGGELKLQEFDRWSAPLDRLLAQRLSLGVARASGVASVYAYPQPGMDGGELRIAVD
EEECCCCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEE
VRGLSLKPGQGAALEAAWQLQNAADGRILARGGFSRSQPVASDQPGALLAGLQTLLDGLA
ECCCEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ADIAAPLAQHPEWWRAG
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIRHWIPAVFLAAALAGCASPQSRFYGLDAPAAPQAQAQFGKRVLLGPVSLPAALDRPQL
CCCHHHHHHHHHHHHHHCCCCHHHEECCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCEE
VLDMGGGELKLQEFDRWSAPLDRLLAQRLSLGVARASGVASVYAYPQPGMDGGELRIAVD
EEECCCCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEE
VRGLSLKPGQGAALEAAWQLQNAADGRILARGGFSRSQPVASDQPGALLAGLQTLLDGLA
ECCCEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ADIAAPLAQHPEWWRAG
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA