| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is prgJ [H]
Identifier: 34497876
GI number: 34497876
Start: 2605891
End: 2606193
Strand: Reverse
Name: prgJ [H]
Synonym: CV_2421
Alternate gene names: 34497876
Gene position: 2606193-2605891 (Counterclockwise)
Preceding gene: 34497877
Following gene: 34497875
Centisome position: 54.85
GC content: 59.08
Gene sequence:
>303_bases ATGAACGTCATCGGCCCCGCCGCATCGCAAGCGCTGGCACAGGCCAGCGATCTAGGACAGACAGACGCCGAAATGGTGTC GCTGGAAGATAGATTGATCCAGGCATTCTCCCGTTCAGCCGTGGCCACCGACGCCGAAAGAAACGACATCATGCAACGAC TGGAGCGGCCGGAGTTGATCTCCAATCCAGCCGAGCTGTTCGCGTTGCAGCAGCGAACCGCCAATTACAACCTCGAGGTT TCGATGATCAGCACGCTGACCCGCAAAACCGTCGGCGCGGTGGAAAGCTTGCTGCGCTCATGA
Upstream 100 bases:
>100_bases ACGCGGTCAAGGCGTTCAAGGACATCGACGCCGCCATCATCCAGAACTTCCGCTAAACCGCGCGCGCCGGCCTTTGCCGG CGCTCTTCACGGAGCTCATC
Downstream 100 bases:
>100_bases TGAAGGCTTGCCTGAAAGCGTTGCTGCTGGCCGCGGCGCTGAGCGGTTGCCAGCAAAAGGACCTGCTGAAAGGATTGGAT CAGCAGCAGGCCAACGAGGT
Product: cell invasion protein - cytoplasmic
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MNVIGPAASQALAQASDLGQTDAEMVSLEDRLIQAFSRSAVATDAERNDIMQRLERPELISNPAELFALQQRTANYNLEV SMISTLTRKTVGAVESLLRS
Sequences:
>Translated_100_residues MNVIGPAASQALAQASDLGQTDAEMVSLEDRLIQAFSRSAVATDAERNDIMQRLERPELISNPAELFALQQRTANYNLEV SMISTLTRKTVGAVESLLRS >Mature_100_residues MNVIGPAASQALAQASDLGQTDAEMVSLEDRLIQAFSRSAVATDAERNDIMQRLERPELISNPAELFALQQRTANYNLEV SMISTLTRKTVGAVESLLRS
Specific function: Required for invasion of epithelial cells [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.flexneri mxiI [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10907; Mature: 10907
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVIGPAASQALAQASDLGQTDAEMVSLEDRLIQAFSRSAVATDAERNDIMQRLERPELI CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH SNPAELFALQQRTANYNLEVSMISTLTRKTVGAVESLLRS CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNVIGPAASQALAQASDLGQTDAEMVSLEDRLIQAFSRSAVATDAERNDIMQRLERPELI CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH SNPAELFALQQRTANYNLEVSMISTLTRKTVGAVESLLRS CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7476203; 11677609 [H]