Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is prgI [H]

Identifier: 34497877

GI number: 34497877

Start: 2606238

End: 2606492

Strand: Reverse

Name: prgI [H]

Synonym: CV_2422

Alternate gene names: 34497877

Gene position: 2606492-2606238 (Counterclockwise)

Preceding gene: 34497878

Following gene: 34497876

Centisome position: 54.86

GC content: 58.43

Gene sequence:

>255_bases
ATGCCAGACCCGGTGAATACCCCATGGAGCGGTTATCTGGATGGCGTTTCCAACCAATTCGACCAAGGCGTGCAGGATCT
GCACGGCGCCGTCGAGCAGGCGCTGAAAGATCTTTCCGCGACGCCATCCGACCCGAAGCTGCTGGCGAAATACCAGAGCA
AGCTGTCCGAGTACAACCTGTACCGCAACGCGCAATCCAACGCGGTCAAGGCGTTCAAGGACATCGACGCCGCCATCATC
CAGAACTTCCGCTAA

Upstream 100 bases:

>100_bases
CAAGGGCAAGTCCTTCAAATATGGAAGCCAGGGCTATGTGAAGCTGAACAGCGGCCATTGGTATTTCCCCAAACCCCTCT
GACCGAAAGGAACCACAGAC

Downstream 100 bases:

>100_bases
ACCGCGCGCGCCGGCCTTTGCCGGCGCTCTTCACGGAGCTCATCATGAACGTCATCGGCCCCGCCGCATCGCAAGCGCTG
GCACAGGCCAGCGATCTAGG

Product: cell invasion protein - cytoplasmic

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MPDPVNTPWSGYLDGVSNQFDQGVQDLHGAVEQALKDLSATPSDPKLLAKYQSKLSEYNLYRNAQSNAVKAFKDIDAAII
QNFR

Sequences:

>Translated_84_residues
MPDPVNTPWSGYLDGVSNQFDQGVQDLHGAVEQALKDLSATPSDPKLLAKYQSKLSEYNLYRNAQSNAVKAFKDIDAAII
QNFR
>Mature_83_residues
PDPVNTPWSGYLDGVSNQFDQGVQDLHGAVEQALKDLSATPSDPKLLAKYQSKLSEYNLYRNAQSNAVKAFKDIDAAIIQ
NFR

Specific function: Required for invasion of epithelial cells [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mxiH/prgI/yscF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021123
- InterPro:   IPR011841 [H]

Pfam domain/function: PF09392 MxiH [H]

EC number: NA

Molecular weight: Translated: 9314; Mature: 9183

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDPVNTPWSGYLDGVSNQFDQGVQDLHGAVEQALKDLSATPSDPKLLAKYQSKLSEYNL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
YRNAQSNAVKAFKDIDAAIIQNFR
HHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PDPVNTPWSGYLDGVSNQFDQGVQDLHGAVEQALKDLSATPSDPKLLAKYQSKLSEYNL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
YRNAQSNAVKAFKDIDAAIIQNFR
HHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7476203; 11677609 [H]