| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is prgI [H]
Identifier: 34497877
GI number: 34497877
Start: 2606238
End: 2606492
Strand: Reverse
Name: prgI [H]
Synonym: CV_2422
Alternate gene names: 34497877
Gene position: 2606492-2606238 (Counterclockwise)
Preceding gene: 34497878
Following gene: 34497876
Centisome position: 54.86
GC content: 58.43
Gene sequence:
>255_bases ATGCCAGACCCGGTGAATACCCCATGGAGCGGTTATCTGGATGGCGTTTCCAACCAATTCGACCAAGGCGTGCAGGATCT GCACGGCGCCGTCGAGCAGGCGCTGAAAGATCTTTCCGCGACGCCATCCGACCCGAAGCTGCTGGCGAAATACCAGAGCA AGCTGTCCGAGTACAACCTGTACCGCAACGCGCAATCCAACGCGGTCAAGGCGTTCAAGGACATCGACGCCGCCATCATC CAGAACTTCCGCTAA
Upstream 100 bases:
>100_bases CAAGGGCAAGTCCTTCAAATATGGAAGCCAGGGCTATGTGAAGCTGAACAGCGGCCATTGGTATTTCCCCAAACCCCTCT GACCGAAAGGAACCACAGAC
Downstream 100 bases:
>100_bases ACCGCGCGCGCCGGCCTTTGCCGGCGCTCTTCACGGAGCTCATCATGAACGTCATCGGCCCCGCCGCATCGCAAGCGCTG GCACAGGCCAGCGATCTAGG
Product: cell invasion protein - cytoplasmic
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MPDPVNTPWSGYLDGVSNQFDQGVQDLHGAVEQALKDLSATPSDPKLLAKYQSKLSEYNLYRNAQSNAVKAFKDIDAAII QNFR
Sequences:
>Translated_84_residues MPDPVNTPWSGYLDGVSNQFDQGVQDLHGAVEQALKDLSATPSDPKLLAKYQSKLSEYNLYRNAQSNAVKAFKDIDAAII QNFR >Mature_83_residues PDPVNTPWSGYLDGVSNQFDQGVQDLHGAVEQALKDLSATPSDPKLLAKYQSKLSEYNLYRNAQSNAVKAFKDIDAAIIQ NFR
Specific function: Required for invasion of epithelial cells [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mxiH/prgI/yscF family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021123 - InterPro: IPR011841 [H]
Pfam domain/function: PF09392 MxiH [H]
EC number: NA
Molecular weight: Translated: 9314; Mature: 9183
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDPVNTPWSGYLDGVSNQFDQGVQDLHGAVEQALKDLSATPSDPKLLAKYQSKLSEYNL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH YRNAQSNAVKAFKDIDAAIIQNFR HHCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PDPVNTPWSGYLDGVSNQFDQGVQDLHGAVEQALKDLSATPSDPKLLAKYQSKLSEYNL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH YRNAQSNAVKAFKDIDAAIIQNFR HHCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7476203; 11677609 [H]