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The map label for this gene is 33863378

Identifier: 33863378

GI number: 33863378

Start: 1199183

End: 1200655

Strand: Reverse

Name: 33863378

Synonym: PMT1107

Alternate gene names: NA

Gene position: 1200655-1199183 (Counterclockwise)

Preceding gene: 33863379

Following gene: 33863371

Centisome position: 49.8

GC content: 55.47

Gene sequence:

>1473_bases
GTGACGCAGTCTTCTTTAGATCCTGCGACTGTTGAGCTCACCGCAGATCAGCAGCAGGCTGCCGAAGCGTTCAGTTCTTG
GTTGGATGATGCGAATCATGGCAATCCCTTTGTTCTGAGTGGTTTCGCCGGCAGTGGGAAGACGTTCCTTTCGATGCGAT
TGTTGCGTCAGGTGGAGGACGCTGGACTGTGTTGGACAGTTGTTGCGCCAACTCATAAGGCTGTTGGTGTGCTTCGTCAG
GCTCTAGATCTTGAAGGCCTCAGGCCCACCTGGTATCCCTCCACGATTCATCGGCTGCTTCGCCTGAAATTGAAGCGGCA
GGGTGATCTTGAGCTGTGTGAGTCAACAGAGCAAACGGCCCAGTCTCTAGAGCAATTGGGCCTGGTTCTGATCGATGAAT
CTTCGATGATCGACAGCACCCTGCTGGGTCTTGCTCTGCAGTGTGCCCACCCCTTTCGGACACGTCTCGTTTTTGTAGGT
GATCCTGCTCAACTGCCTCCTATCGGTGAGGCCCAAAGCCCTGTGTTCTCGATGCATAGAGCCTGTACAGCAACATTGCA
GCAGGTGGTGCGTCATCAGGGCCCTGTGTTGCGATTGGCGAGTCGTCTTCGCGATGGCAGCTTGCCCTGTCAGTCCCCGC
CATGCTTTCCCTTGATTGAGGATGAGCTGGGCCGGGTTGGATGCATGGATCAAAACAACTGGCTGAAGCGAGCTCAGGCT
GCCTTGCAATCCGCGGCCATTCAGGATAACCCTGATGCAGCAAGGATTCTTTGCTACACGAATCGCAGCTTGGAGCAATT
GGTTCCCCATGCAAGGCGGGCGATTCATGGTGATATGGCCGATCAGTTGCCGGTACTCCCCGGAGAGGTCTTGATTGCAC
GCAAAGCAGTCATGGCACCGGCTTCTCGTAGTGGTGCCGAGACTGGCGAGGAACCCGACATGGTGCTCGGATCAAACCGA
GAGGTGGTTGTCCGTGACGTCACTCCGGAACGCTGTGATCTTGCAGAGTTTGGTTTAGAAGGCCAAAGCGATTGGTCTGT
ACCGGTGGTTGACACCCTGACGGCCAAAGTTCGAGCAGGTGAGCTGGATTTGGAGTTGCGTTTGCAGCCGCCAGTTGGTT
CTGAGGGCAGACGTTTGCTCGATACCACGTTGCAAAGGCTCAGGGTTGAGGCAAAAGCGGCGGGCAAAAGTGATGGTCGC
TCTTTATGGCGGCGTTTTTTTCTGCTTCGAGATGCCTTCGCATCATTGGGCCCTGCGGCGGTTCTTACCGTCCATCGCAG
CCAGGGGAGCAGCTTCGGGGAAGTGTTTGTTGCTGGTGATGTTTTCTGGCCTCAAGATCTCAGCTTGAGACGACAACTGG
TTTATGTGGCTGTTAGTCGTGCCCGTACAGGTGTGTGGCTTGTGGGGAAAACAGGAGCCGCCGCACAAAGTCGCTGGCTG
GATCAACTCAGATCACAATCGTCAGACCGCTGA

Upstream 100 bases:

>100_bases
TGTTAGTGGGCAGTTTGATCGGCCCTGCAGTGGCTTTACCGGGATTGGTTTTTGTTGGTTCTCCACTCCATCTCAGCCAG
TTATTGGGTATGACATTGGG

Downstream 100 bases:

>100_bases
TTCCTTGCCAACCAAGGTAGGCACCTAGAGCAAAACTCACCCCACCAACGATTAAGTCACCTTTGGCAAATAAAAGTTGT
TTCCCAGATTGCAGCAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Helicase; AAA ATPase; ATP-Dependent DNA Helicase Dda; Bacteriophage-Type DNA Helicase; Helicase; Deoxyribonuclease; DNA Helicase Related Phage

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MTQSSLDPATVELTADQQQAAEAFSSWLDDANHGNPFVLSGFAGSGKTFLSMRLLRQVEDAGLCWTVVAPTHKAVGVLRQ
ALDLEGLRPTWYPSTIHRLLRLKLKRQGDLELCESTEQTAQSLEQLGLVLIDESSMIDSTLLGLALQCAHPFRTRLVFVG
DPAQLPPIGEAQSPVFSMHRACTATLQQVVRHQGPVLRLASRLRDGSLPCQSPPCFPLIEDELGRVGCMDQNNWLKRAQA
ALQSAAIQDNPDAARILCYTNRSLEQLVPHARRAIHGDMADQLPVLPGEVLIARKAVMAPASRSGAETGEEPDMVLGSNR
EVVVRDVTPERCDLAEFGLEGQSDWSVPVVDTLTAKVRAGELDLELRLQPPVGSEGRRLLDTTLQRLRVEAKAAGKSDGR
SLWRRFFLLRDAFASLGPAAVLTVHRSQGSSFGEVFVAGDVFWPQDLSLRRQLVYVAVSRARTGVWLVGKTGAAAQSRWL
DQLRSQSSDR

Sequences:

>Translated_490_residues
MTQSSLDPATVELTADQQQAAEAFSSWLDDANHGNPFVLSGFAGSGKTFLSMRLLRQVEDAGLCWTVVAPTHKAVGVLRQ
ALDLEGLRPTWYPSTIHRLLRLKLKRQGDLELCESTEQTAQSLEQLGLVLIDESSMIDSTLLGLALQCAHPFRTRLVFVG
DPAQLPPIGEAQSPVFSMHRACTATLQQVVRHQGPVLRLASRLRDGSLPCQSPPCFPLIEDELGRVGCMDQNNWLKRAQA
ALQSAAIQDNPDAARILCYTNRSLEQLVPHARRAIHGDMADQLPVLPGEVLIARKAVMAPASRSGAETGEEPDMVLGSNR
EVVVRDVTPERCDLAEFGLEGQSDWSVPVVDTLTAKVRAGELDLELRLQPPVGSEGRRLLDTTLQRLRVEAKAAGKSDGR
SLWRRFFLLRDAFASLGPAAVLTVHRSQGSSFGEVFVAGDVFWPQDLSLRRQLVYVAVSRARTGVWLVGKTGAAAQSRWL
DQLRSQSSDR
>Mature_489_residues
TQSSLDPATVELTADQQQAAEAFSSWLDDANHGNPFVLSGFAGSGKTFLSMRLLRQVEDAGLCWTVVAPTHKAVGVLRQA
LDLEGLRPTWYPSTIHRLLRLKLKRQGDLELCESTEQTAQSLEQLGLVLIDESSMIDSTLLGLALQCAHPFRTRLVFVGD
PAQLPPIGEAQSPVFSMHRACTATLQQVVRHQGPVLRLASRLRDGSLPCQSPPCFPLIEDELGRVGCMDQNNWLKRAQAA
LQSAAIQDNPDAARILCYTNRSLEQLVPHARRAIHGDMADQLPVLPGEVLIARKAVMAPASRSGAETGEEPDMVLGSNRE
VVVRDVTPERCDLAEFGLEGQSDWSVPVVDTLTAKVRAGELDLELRLQPPVGSEGRRLLDTTLQRLRVEAKAAGKSDGRS
LWRRFFLLRDAFASLGPAAVLTVHRSQGSSFGEVFVAGDVFWPQDLSLRRQLVYVAVSRARTGVWLVGKTGAAAQSRWLD
QLRSQSSDR

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.11.5

Molecular weight: Translated: 53671; Mature: 53540

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSSLDPATVELTADQQQAAEAFSSWLDDANHGNPFVLSGFAGSGKTFLSMRLLRQVED
CCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC
AGLCWTVVAPTHKAVGVLRQALDLEGLRPTWYPSTIHRLLRLKLKRQGDLELCESTEQTA
CCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
QSLEQLGLVLIDESSMIDSTLLGLALQCAHPFRTRLVFVGDPAQLPPIGEAQSPVFSMHR
HHHHHCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHH
ACTATLQQVVRHQGPVLRLASRLRDGSLPCQSPPCFPLIEDELGRVGCMDQNNWLKRAQA
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHH
ALQSAAIQDNPDAARILCYTNRSLEQLVPHARRAIHGDMADQLPVLPGEVLIARKAVMAP
HHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHCC
ASRSGAETGEEPDMVLGSNREVVVRDVTPERCDLAEFGLEGQSDWSVPVVDTLTAKVRAG
CCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHEECC
ELDLELRLQPPVGSEGRRLLDTTLQRLRVEAKAAGKSDGRSLWRRFFLLRDAFASLGPAA
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEE
VLTVHRSQGSSFGEVFVAGDVFWPQDLSLRRQLVYVAVSRARTGVWLVGKTGAAAQSRWL
EEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
DQLRSQSSDR
HHHHHCCCCC
>Mature Secondary Structure 
TQSSLDPATVELTADQQQAAEAFSSWLDDANHGNPFVLSGFAGSGKTFLSMRLLRQVED
CCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC
AGLCWTVVAPTHKAVGVLRQALDLEGLRPTWYPSTIHRLLRLKLKRQGDLELCESTEQTA
CCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
QSLEQLGLVLIDESSMIDSTLLGLALQCAHPFRTRLVFVGDPAQLPPIGEAQSPVFSMHR
HHHHHCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHH
ACTATLQQVVRHQGPVLRLASRLRDGSLPCQSPPCFPLIEDELGRVGCMDQNNWLKRAQA
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHH
ALQSAAIQDNPDAARILCYTNRSLEQLVPHARRAIHGDMADQLPVLPGEVLIARKAVMAP
HHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHCC
ASRSGAETGEEPDMVLGSNREVVVRDVTPERCDLAEFGLEGQSDWSVPVVDTLTAKVRAG
CCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHEECC
ELDLELRLQPPVGSEGRRLLDTTLQRLRVEAKAAGKSDGRSLWRRFFLLRDAFASLGPAA
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEE
VLTVHRSQGSSFGEVFVAGDVFWPQDLSLRRQLVYVAVSRARTGVWLVGKTGAAAQSRWL
EEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
DQLRSQSSDR
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA