| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863371
Identifier: 33863371
GI number: 33863371
Start: 1191440
End: 1192012
Strand: Reverse
Name: 33863371
Synonym: PMT1100
Alternate gene names: NA
Gene position: 1192012-1191440 (Counterclockwise)
Preceding gene: 33863378
Following gene: 33863369
Centisome position: 49.44
GC content: 52.88
Gene sequence:
>573_bases GTGGTACCTATCCAGGATCTTCAACCACGTTCGGGTTCCGTGCTCATAGCCTCACCAGAGTCGGTCTCTGTGAAGCGACA GGCCATCGAGCAGACGATGGAACGCTTGCCTCATGGGGCGCGACGACTTGCGGTCCAGCTGAGGACGCCGATCAAAGAGT CTTTGCTATGGGACGTTCTGACCGATTACGACAAACTTAGTGAATTCATCCCAAACCTTGCCAGCAGCACAGTGTTGGAA CGCACTGGCAATCGAGTGTGGCTGAACCAGGTGGGTTCTCAACAGTTGCTGGGGCTGAGGTTTTCAGCTCAGGTTCAGTT GGAGTTGGTGGAATATCGAGCTGAGGGCAAGTTGCAGTTCCATTTGCTTAAAGGGGACTTCAGACGTTTTGAGGGAAGTT GGATCATGCGTGAGCTGGCTGAGGGAACGTCAACTTCCCTTCTCTACGAGCTCACTGTTCAGGGCTGCATTGGTATGCCA GTTGCCTTGATTGAACAGCGATTGAGAGATGATCTCACTGCAAATCTACTTGCAGTGGAGATGGAGGGCTTGCGTCGCCA GTCCTTGGTTTGA
Upstream 100 bases:
>100_bases GTTACGTTTAGCGATTGGCACAGCTCAGTCTCTGGGCATTGGCTCAACGGTCATTGAATTCTTTCGGTATTCTTAGGCGT CTTGAGCACAGCCTCTTCTT
Downstream 100 bases:
>100_bases ACACCTCAAAATATGCAGATCATCTTGAGCAGCGTTTGTTTAAATTGTTCGAGCTAAGGGTCTACGAAAAAGGTCATAGC TTTTGCGAATAGAAGCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MVPIQDLQPRSGSVLIASPESVSVKRQAIEQTMERLPHGARRLAVQLRTPIKESLLWDVLTDYDKLSEFIPNLASSTVLE RTGNRVWLNQVGSQQLLGLRFSAQVQLELVEYRAEGKLQFHLLKGDFRRFEGSWIMRELAEGTSTSLLYELTVQGCIGMP VALIEQRLRDDLTANLLAVEMEGLRRQSLV
Sequences:
>Translated_190_residues MVPIQDLQPRSGSVLIASPESVSVKRQAIEQTMERLPHGARRLAVQLRTPIKESLLWDVLTDYDKLSEFIPNLASSTVLE RTGNRVWLNQVGSQQLLGLRFSAQVQLELVEYRAEGKLQFHLLKGDFRRFEGSWIMRELAEGTSTSLLYELTVQGCIGMP VALIEQRLRDDLTANLLAVEMEGLRRQSLV >Mature_190_residues MVPIQDLQPRSGSVLIASPESVSVKRQAIEQTMERLPHGARRLAVQLRTPIKESLLWDVLTDYDKLSEFIPNLASSTVLE RTGNRVWLNQVGSQQLLGLRFSAQVQLELVEYRAEGKLQFHLLKGDFRRFEGSWIMRELAEGTSTSLLYELTVQGCIGMP VALIEQRLRDDLTANLLAVEMEGLRRQSLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21516; Mature: 21516
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPIQDLQPRSGSVLIASPESVSVKRQAIEQTMERLPHGARRLAVQLRTPIKESLLWDVL CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHH TDYDKLSEFIPNLASSTVLERTGNRVWLNQVGSQQLLGLRFSAQVQLELVEYRAEGKLQF HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCEEECHHEEHHEEEECCCCCEEE HLLKGDFRRFEGSWIMRELAEGTSTSLLYELTVQGCIGMPVALIEQRLRDDLTANLLAVE EEECCHHHHHCHHHHHHHHHCCCCHHHHHHEEHHCCCCCCHHHHHHHHHHHHHHHHHHHH MEGLRRQSLV HHHHHHHCCC >Mature Secondary Structure MVPIQDLQPRSGSVLIASPESVSVKRQAIEQTMERLPHGARRLAVQLRTPIKESLLWDVL CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHH TDYDKLSEFIPNLASSTVLERTGNRVWLNQVGSQQLLGLRFSAQVQLELVEYRAEGKLQF HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCEEECHHEEHHEEEECCCCCEEE HLLKGDFRRFEGSWIMRELAEGTSTSLLYELTVQGCIGMPVALIEQRLRDDLTANLLAVE EEECCHHHHHCHHHHHHHHHCCCCHHHHHHEEHHCCCCCCHHHHHHHHHHHHHHHHHHHH MEGLRRQSLV HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA