| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is yuiD [H]
Identifier: 33863379
GI number: 33863379
Start: 1200652
End: 1201164
Strand: Reverse
Name: yuiD [H]
Synonym: PMT1108
Alternate gene names: 33863379
Gene position: 1201164-1200652 (Counterclockwise)
Preceding gene: 33863380
Following gene: 33863378
Centisome position: 49.82
GC content: 51.27
Gene sequence:
>513_bases ATGATTGTCAGCGATTCTTCCCCATCAGCGTGGCTTGGACTTTTAGATAATGCTGTCTTGGCTTGGGGGCTTGCCGCGTG TGGTTTAGCTCAGCTTTCCAAGCTGATTGTGGAGTTAATTTTTTATCGTCGCTGGCGACCTGCAGTGCTTCTTGAAACGG GTGGCATGCCTTCGAGCCATTCGGCCCTTGTAACTGGTACAGCAGCAGGTGTGGGATGGGAGATGGGTTTTGATCACTCA GGATTTGCTCTTGCAGCCACTGTGGCTTTTGTGGTCATGTATGACGCCAGTGGGATTAGACGTGCTGCGGGATTTACCGC AGCACGGGTGAATCTTTTGCCTGTGGAGACCTGGCCCACTCCACCAGAAAAACAGCTCAAAGAAAGCCTTGGTCACACTC GTTTTGAAGTGTTAGTGGGCAGTTTGATCGGCCCTGCAGTGGCTTTACCGGGATTGGTTTTTGTTGGTTCTCCACTCCAT CTCAGCCAGTTATTGGGTATGACATTGGGGTGA
Upstream 100 bases:
>100_bases CAGAACTCCTTGTGAGCGAAGCCAAGGCAGCACTAGAGCCTTGGCAAGCTTCTGCTGCACCTTTGCTGGCACTAGCCGAT TACATCACCAGCCGCGATCG
Downstream 100 bases:
>100_bases CGCAGTCTTCTTTAGATCCTGCGACTGTTGAGCTCACCGCAGATCAGCAGCAGGCTGCCGAAGCGTTCAGTTCTTGGTTG GATGATGCGAATCATGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MIVSDSSPSAWLGLLDNAVLAWGLAACGLAQLSKLIVELIFYRRWRPAVLLETGGMPSSHSALVTGTAAGVGWEMGFDHS GFALAATVAFVVMYDASGIRRAAGFTAARVNLLPVETWPTPPEKQLKESLGHTRFEVLVGSLIGPAVALPGLVFVGSPLH LSQLLGMTLG
Sequences:
>Translated_170_residues MIVSDSSPSAWLGLLDNAVLAWGLAACGLAQLSKLIVELIFYRRWRPAVLLETGGMPSSHSALVTGTAAGVGWEMGFDHS GFALAATVAFVVMYDASGIRRAAGFTAARVNLLPVETWPTPPEKQLKESLGHTRFEVLVGSLIGPAVALPGLVFVGSPLH LSQLLGMTLG >Mature_170_residues MIVSDSSPSAWLGLLDNAVLAWGLAACGLAQLSKLIVELIFYRRWRPAVLLETGGMPSSHSALVTGTAAGVGWEMGFDHS GFALAATVAFVVMYDASGIRRAAGFTAARVNLLPVETWPTPPEKQLKESLGHTRFEVLVGSLIGPAVALPGLVFVGSPLH LSQLLGMTLG
Specific function: Unknown
COG id: COG1963
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003832 [H]
Pfam domain/function: PF02681 DUF212 [H]
EC number: NA
Molecular weight: Translated: 17839; Mature: 17839
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVSDSSPSAWLGLLDNAVLAWGLAACGLAQLSKLIVELIFYRRWRPAVLLETGGMPSSH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC SALVTGTAAGVGWEMGFDHSGFALAATVAFVVMYDASGIRRAAGFTAARVNLLPVETWPT CEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHEEEEEEECCCCC PPEKQLKESLGHTRFEVLVGSLIGPAVALPGLVFVGSPLHLSQLLGMTLG CCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHCCC >Mature Secondary Structure MIVSDSSPSAWLGLLDNAVLAWGLAACGLAQLSKLIVELIFYRRWRPAVLLETGGMPSSH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC SALVTGTAAGVGWEMGFDHSGFALAATVAFVVMYDASGIRRAAGFTAARVNLLPVETWPT CEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHEEEEEEECCCCC PPEKQLKESLGHTRFEVLVGSLIGPAVALPGLVFVGSPLHLSQLLGMTLG CCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]