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The map label for this gene is yebA [C]

Identifier: 33863024

GI number: 33863024

Start: 820722

End: 821795

Strand: Direct

Name: yebA [C]

Synonym: PMT0752

Alternate gene names: 33863024

Gene position: 820722-821795 (Clockwise)

Preceding gene: 33863023

Following gene: 33863026

Centisome position: 34.04

GC content: 46.83

Gene sequence:

>1074_bases
ATGAACTCGCTGCCGTTGCTGATCTCAACCATCGCCGCGCCAGTACTTGCACTCGGGACACTCATCCACCTGCCTGGCCA
AGCCAGTAAATATCATCATCCCTCCTCCCATCCATTACCACCACCTGTTCTCCCTCAACCTGATGGACAAATATGGGTCA
AAGTCAACAGACCAGCAACGATTAAATTCATTGCTCATCAGCTTGGCATCTCTTTGTCTGAGATTTCAGCGCTCAATGAT
CAGCCATCAGCCAACAGGCTGATGGCTGGCAGTTGGATTGTGTTACCTGTCTCAGCTATGGCTCGTTTGCAGCAGTCCAA
GTCTTTAGACATAACAACAGTCAGCCAAAACCTGCCGCCAGTGACCGCGCCTGCTCCACCTCCAAGCTTGGTCAAAATAG
AAAGCGGAGACTCGATTGCATCAATTGCCAAGCAGCATGGTCAAACACATCAGAGGATTCGTCAGCTAAATCCAGGACTT
CAGTTCAATCAACTCACAGTGGGTGGGAATATTCGAGTTGCCAAGGCAACACGTCCTCAAAAGAGGAAATTAACTACAAC
TCTTGGCAGTAACAACCTTCAATCCCTATCTCTAATAAGTAATGGAGTTGGATGGATAGATCTAGGTGATACTAACTCTT
ATATTTGGCCGACAAAGGGTGTAATCACGTCAGGATATGGCTGGCGTTGGGGAAGAATGCATCAAGGTATTGATATCGCG
AATAAGGTCAATACACCTATCCTTTCGGCAAAAGGCGGCATTGTTTCCTATGCGGGCTGGAAAGGAGCTTACGGATATCT
TGTAGAAATAGCACATGTAAACGGAGATTCAACTCGTTATGCTCACAACAATCGACTACTTGTTAAAAAGGGGCAGATCT
TACCCCAAGGAGCCACAATCGCAACAATGGGGAGCACAGGACGAAGCACCGGGCCTCACCTACACTTTGAGATAAGAAAG
AAGAGTGGAACAGCAATCAATCCAGCAACACTCCTACCCTCAAAAATAGTGACAATAGCGCCCAATCTTCACTATTGCTA
TCATCACAAATCCTTCCACGAACATCATGCATGA

Upstream 100 bases:

>100_bases
CGTTCATGCACCCCTTGCGGATCTCTAACTCAAACGTTAATTTTCGCGCAAACTCCTCAAGGCTGAATGTCTAAGGGGTG
CATCACGTTGATTGGGTCCC

Downstream 100 bases:

>100_bases
TTAGATATATAATCCCTGAATTAGACCATTTTTCCTATTTTAATCAGAGAAATATAGGGAAACTAACACTTGCAAGTCTC
TATTGCCAGCATGTATTCAA

Product: LysM motif-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNSLPLLISTIAAPVLALGTLIHLPGQASKYHHPSSHPLPPPVLPQPDGQIWVKVNRPATIKFIAHQLGISLSEISALND
QPSANRLMAGSWIVLPVSAMARLQQSKSLDITTVSQNLPPVTAPAPPPSLVKIESGDSIASIAKQHGQTHQRIRQLNPGL
QFNQLTVGGNIRVAKATRPQKRKLTTTLGSNNLQSLSLISNGVGWIDLGDTNSYIWPTKGVITSGYGWRWGRMHQGIDIA
NKVNTPILSAKGGIVSYAGWKGAYGYLVEIAHVNGDSTRYAHNNRLLVKKGQILPQGATIATMGSTGRSTGPHLHFEIRK
KSGTAINPATLLPSKIVTIAPNLHYCYHHKSFHEHHA

Sequences:

>Translated_357_residues
MNSLPLLISTIAAPVLALGTLIHLPGQASKYHHPSSHPLPPPVLPQPDGQIWVKVNRPATIKFIAHQLGISLSEISALND
QPSANRLMAGSWIVLPVSAMARLQQSKSLDITTVSQNLPPVTAPAPPPSLVKIESGDSIASIAKQHGQTHQRIRQLNPGL
QFNQLTVGGNIRVAKATRPQKRKLTTTLGSNNLQSLSLISNGVGWIDLGDTNSYIWPTKGVITSGYGWRWGRMHQGIDIA
NKVNTPILSAKGGIVSYAGWKGAYGYLVEIAHVNGDSTRYAHNNRLLVKKGQILPQGATIATMGSTGRSTGPHLHFEIRK
KSGTAINPATLLPSKIVTIAPNLHYCYHHKSFHEHHA
>Mature_357_residues
MNSLPLLISTIAAPVLALGTLIHLPGQASKYHHPSSHPLPPPVLPQPDGQIWVKVNRPATIKFIAHQLGISLSEISALND
QPSANRLMAGSWIVLPVSAMARLQQSKSLDITTVSQNLPPVTAPAPPPSLVKIESGDSIASIAKQHGQTHQRIRQLNPGL
QFNQLTVGGNIRVAKATRPQKRKLTTTLGSNNLQSLSLISNGVGWIDLGDTNSYIWPTKGVITSGYGWRWGRMHQGIDIA
NKVNTPILSAKGGIVSYAGWKGAYGYLVEIAHVNGDSTRYAHNNRLLVKKGQILPQGATIATMGSTGRSTGPHLHFEIRK
KSGTAINPATLLPSKIVTIAPNLHYCYHHKSFHEHHA

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=97, Percent_Identity=47.4226804123711, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI87082174, Length=211, Percent_Identity=33.175355450237, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1789099, Length=122, Percent_Identity=42.6229508196721, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082297, Length=120, Percent_Identity=34.1666666666667, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 38512; Mature: 38512

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLPLLISTIAAPVLALGTLIHLPGQASKYHHPSSHPLPPPVLPQPDGQIWVKVNRPAT
CCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEE
IKFIAHQLGISLSEISALNDQPSANRLMAGSWIVLPVSAMARLQQSKSLDITTVSQNLPP
EEEEHHHHCCCHHHHHHCCCCCCCCEEEECCEEEEEHHHHHHHHHCCCCEEEEECCCCCC
VTAPAPPPSLVKIESGDSIASIAKQHGQTHQRIRQLNPGLQFNQLTVGGNIRVAKATRPQ
CCCCCCCCCEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCC
KRKLTTTLGSNNLQSLSLISNGVGWIDLGDTNSYIWPTKGVITSGYGWRWGRMHQGIDIA
HHEEEEECCCCCCCEEHHHHCCCCEEEECCCCCEEECCCCEEECCCCCCCCCCCCCCCHH
NKVNTPILSAKGGIVSYAGWKGAYGYLVEIAHVNGDSTRYAHNNRLLVKKGQILPQGATI
HHCCCCEEECCCCEEEECCCCCCCEEEEEEEEECCCCCEEECCCEEEEECCCCCCCCCEE
ATMGSTGRSTGPHLHFEIRKKSGTAINPATLLPSKIVTIAPNLHYCYHHKSFHEHHA
EEECCCCCCCCCEEEEEEECCCCCCCCCHHHCCCCEEEECCCCEEEECCCCHHHCCC
>Mature Secondary Structure
MNSLPLLISTIAAPVLALGTLIHLPGQASKYHHPSSHPLPPPVLPQPDGQIWVKVNRPAT
CCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEE
IKFIAHQLGISLSEISALNDQPSANRLMAGSWIVLPVSAMARLQQSKSLDITTVSQNLPP
EEEEHHHHCCCHHHHHHCCCCCCCCEEEECCEEEEEHHHHHHHHHCCCCEEEEECCCCCC
VTAPAPPPSLVKIESGDSIASIAKQHGQTHQRIRQLNPGLQFNQLTVGGNIRVAKATRPQ
CCCCCCCCCEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCC
KRKLTTTLGSNNLQSLSLISNGVGWIDLGDTNSYIWPTKGVITSGYGWRWGRMHQGIDIA
HHEEEEECCCCCCCEEHHHHCCCCEEEECCCCCEEECCCCEEECCCCCCCCCCCCCCCHH
NKVNTPILSAKGGIVSYAGWKGAYGYLVEIAHVNGDSTRYAHNNRLLVKKGQILPQGATI
HHCCCCEEECCCCEEEECCCCCCCEEEEEEEEECCCCCEEECCCEEEEECCCCCCCCCEE
ATMGSTGRSTGPHLHFEIRKKSGTAINPATLLPSKIVTIAPNLHYCYHHKSFHEHHA
EEECCCCCCCCCEEEEEEECCCCCCCCCHHHCCCCEEEECCCCEEEECCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7959068; 10984043 [H]