Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
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Accession | NC_005071 |
Length | 2,410,873 |
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The map label for this gene is pykF [H]
Identifier: 33862951
GI number: 33862951
Start: 735528
End: 737345
Strand: Reverse
Name: pykF [H]
Synonym: PMT0679
Alternate gene names: 33862951
Gene position: 737345-735528 (Counterclockwise)
Preceding gene: 33862954
Following gene: 33862950
Centisome position: 30.58
GC content: 50.77
Gene sequence:
>1818_bases ATGGTAGTTTCCGCGATGTTTCAGGTCCCGTTGATGGCCCAGATTGATCTGACACGACGGACCAAAATTGTTGCCACCAT AGGTCCGGCAACCGAGAGCGCCGAACGAATCCGAGAACTCGTTGAGGTAGGTGCTACCACCTTCCGGCTGAATTTCTCAC ACGGCGACCATGACGAGCACGCCAAGCGCATCTCCACCATCCGTCAGGTTTCTGATGAATTGGGAATGCACATCGGCATT CTTCAAGACTTGCAAGGCCCCAAAATTCGCCTGGGTCGTTTTGATAAGGGGCCTATCACTCTGGCCAATGGCGATTCCTT CGCACTGACCTCCAAACAAGTTCAATGCAATCAGTCAGTGGCAACCGTCACTTACGACAAGCTTGCAGACGAAGTCACGA CCGGCAGCCGAATCTTGCTTGATGACGGTCGAGTGGAGATGAAAGTCTTAAAAATCGATCAAAGCGAACAAACCTTGCAC TGCATCGTCACGGTGGGAGGGGTGCTCTCAAATAACAAGGGAGTGAATTTCCCTGATGTACAGCTTTCGGTTCGCGCCCT TACAGAGAAAGATCGCCAAGATCTCGCCTTTGGCCTCCAGCAAGGGGTGGACTGGGTCGCACTGAGCTTTGTGCGAAACC CTTCGGACATGAAAGAGATCCGCAAACTCATCCGCGATCATGGGCACAGCACCCCAGTGATCGCGAAGATCGAGAAATTT GAGGCGATTGATCAAATCGATTCAATCCTTCCTCTCTGTGATGGAGTCATGGTTGCAAGGGGGGACTTAGGCGTTGAGAT GCCAGCCGAAGAAGTGCCTCTACTGCAAAAGGATTTGATTCGCAAGGCCAACAGCCTTGGAATTCCAATCATCACAGCCA CCCAGATGCTCGACTCGATGGCCTCAAGCCCGAGGCCCACCAGAGCAGAAGTCAGTGATGTAGCAAATGCGATCCTTGAT GGTACTGATGCAGTGATGCTCTCGAACGAAACCGCTGTAGGAGACTATCCAGTGGAGGCGGTTCAAACGATGGCCACCAT TGCCAGACGGATTGAACGGGACTATCCACAGCGTCCAATCGAAACTTATCTAGCCAGCACCATTTCCAACGCGATTAGTT CAGCCGTAAGCAGCATCGCCAGTCATCTCAACGCGGCAGCAATCGTGCCACTAACTGAAAGTGGTGCAACTGCTCACAAC GTCAGTAAATTCCGCCCAGCAGCGCCAATTTTGGCCGTAACCAACAAATTGGCTGTAGCAAGAAAACTTCAATTGGCATG GGGTGTTACCCCACTGCTTGTCCCAACCCAAAAAAGTACCACTGCAACCTTCAGTGATGCAATTGCTGTTGCCCAGGAAT TGGGTCTTCTCAAAGAAGGAGATCTAACAATTCAAACTGCAGGAACCCTTGCTGGCGTGAGCGGGTCCACAGATCTTGTC AAAGTAGGAATTGTCAGTGCAGTACTTGGCCAAGGGATCGGTATTGGCAATGGAACCGTTAGCGGCAAGGTCAGATTTGC TTTCTCCCCAAACGACTCAACAAAAATTGAACCAGGCGAGATTCTGGTCATTCATGAAACAAGCGATGACTATCTCGATG CAATCAGAAAGTCTGCAGGAGTGATTACAGAACAAGAAGGAGAGGAATACCACGCAGAAATGATCTCAAAACGACTAGGG ATTCCGTTCATCATTGGGATAGCACATGCCACGAGAAACCTGCTTGAAGGAGAGGTGGTAACAATGCAGCTCAGTAATGG CAAAGTTCATCGCGGCACAGGCGGCAAGCTGCCAATGAAGCTCGACTCAATGGACTGA
Upstream 100 bases:
>100_bases ATTCGGATAGCGGGCCGTAGCTCGAGCTCCATGCTGGTAATGATTAATGTCCATAGAAAATCATTGGCAACGCTGTCAAT AACAACGTTTTGAGGCCTGG
Downstream 100 bases:
>100_bases GGGCTCATGAATAGCTCACTTCCGCTCATCGAAACGGTGAGCATGGCGTTCTCAACCCTTAAAGCCAATCGCCTACGTAG TCTCCTGACAATGCTCGGCA
Product: pyruvate kinase
Products: NA
Alternate protein names: PK 2 [H]
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MVVSAMFQVPLMAQIDLTRRTKIVATIGPATESAERIRELVEVGATTFRLNFSHGDHDEHAKRISTIRQVSDELGMHIGI LQDLQGPKIRLGRFDKGPITLANGDSFALTSKQVQCNQSVATVTYDKLADEVTTGSRILLDDGRVEMKVLKIDQSEQTLH CIVTVGGVLSNNKGVNFPDVQLSVRALTEKDRQDLAFGLQQGVDWVALSFVRNPSDMKEIRKLIRDHGHSTPVIAKIEKF EAIDQIDSILPLCDGVMVARGDLGVEMPAEEVPLLQKDLIRKANSLGIPIITATQMLDSMASSPRPTRAEVSDVANAILD GTDAVMLSNETAVGDYPVEAVQTMATIARRIERDYPQRPIETYLASTISNAISSAVSSIASHLNAAAIVPLTESGATAHN VSKFRPAAPILAVTNKLAVARKLQLAWGVTPLLVPTQKSTTATFSDAIAVAQELGLLKEGDLTIQTAGTLAGVSGSTDLV KVGIVSAVLGQGIGIGNGTVSGKVRFAFSPNDSTKIEPGEILVIHETSDDYLDAIRKSAGVITEQEGEEYHAEMISKRLG IPFIIGIAHATRNLLEGEVVTMQLSNGKVHRGTGGKLPMKLDSMD
Sequences:
>Translated_605_residues MVVSAMFQVPLMAQIDLTRRTKIVATIGPATESAERIRELVEVGATTFRLNFSHGDHDEHAKRISTIRQVSDELGMHIGI LQDLQGPKIRLGRFDKGPITLANGDSFALTSKQVQCNQSVATVTYDKLADEVTTGSRILLDDGRVEMKVLKIDQSEQTLH CIVTVGGVLSNNKGVNFPDVQLSVRALTEKDRQDLAFGLQQGVDWVALSFVRNPSDMKEIRKLIRDHGHSTPVIAKIEKF EAIDQIDSILPLCDGVMVARGDLGVEMPAEEVPLLQKDLIRKANSLGIPIITATQMLDSMASSPRPTRAEVSDVANAILD GTDAVMLSNETAVGDYPVEAVQTMATIARRIERDYPQRPIETYLASTISNAISSAVSSIASHLNAAAIVPLTESGATAHN VSKFRPAAPILAVTNKLAVARKLQLAWGVTPLLVPTQKSTTATFSDAIAVAQELGLLKEGDLTIQTAGTLAGVSGSTDLV KVGIVSAVLGQGIGIGNGTVSGKVRFAFSPNDSTKIEPGEILVIHETSDDYLDAIRKSAGVITEQEGEEYHAEMISKRLG IPFIIGIAHATRNLLEGEVVTMQLSNGKVHRGTGGKLPMKLDSMD >Mature_605_residues MVVSAMFQVPLMAQIDLTRRTKIVATIGPATESAERIRELVEVGATTFRLNFSHGDHDEHAKRISTIRQVSDELGMHIGI LQDLQGPKIRLGRFDKGPITLANGDSFALTSKQVQCNQSVATVTYDKLADEVTTGSRILLDDGRVEMKVLKIDQSEQTLH CIVTVGGVLSNNKGVNFPDVQLSVRALTEKDRQDLAFGLQQGVDWVALSFVRNPSDMKEIRKLIRDHGHSTPVIAKIEKF EAIDQIDSILPLCDGVMVARGDLGVEMPAEEVPLLQKDLIRKANSLGIPIITATQMLDSMASSPRPTRAEVSDVANAILD GTDAVMLSNETAVGDYPVEAVQTMATIARRIERDYPQRPIETYLASTISNAISSAVSSIASHLNAAAIVPLTESGATAHN VSKFRPAAPILAVTNKLAVARKLQLAWGVTPLLVPTQKSTTATFSDAIAVAQELGLLKEGDLTIQTAGTLAGVSGSTDLV KVGIVSAVLGQGIGIGNGTVSGKVRFAFSPNDSTKIEPGEILVIHETSDDYLDAIRKSAGVITEQEGEEYHAEMISKRLG IPFIIGIAHATRNLLEGEVVTMQLSNGKVHRGTGGKLPMKLDSMD
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=489, Percent_Identity=40.081799591002, Blast_Score=329, Evalue=4e-90, Organism=Homo sapiens, GI33286420, Length=489, Percent_Identity=40.081799591002, Blast_Score=329, Evalue=4e-90, Organism=Homo sapiens, GI32967597, Length=490, Percent_Identity=40.2040816326531, Blast_Score=327, Evalue=3e-89, Organism=Homo sapiens, GI10835121, Length=490, Percent_Identity=40.2040816326531, Blast_Score=326, Evalue=4e-89, Organism=Homo sapiens, GI33286418, Length=502, Percent_Identity=39.0438247011952, Blast_Score=323, Evalue=2e-88, Organism=Homo sapiens, GI310128732, Length=290, Percent_Identity=38.2758620689655, Blast_Score=197, Evalue=3e-50, Organism=Homo sapiens, GI310128730, Length=290, Percent_Identity=38.2758620689655, Blast_Score=197, Evalue=3e-50, Organism=Homo sapiens, GI310128736, Length=238, Percent_Identity=34.453781512605, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI310128734, Length=238, Percent_Identity=34.453781512605, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI310128738, Length=217, Percent_Identity=32.7188940092166, Blast_Score=121, Evalue=2e-27, Organism=Escherichia coli, GI1787965, Length=473, Percent_Identity=43.7632135306554, Blast_Score=355, Evalue=6e-99, Organism=Escherichia coli, GI1788160, Length=474, Percent_Identity=41.1392405063291, Blast_Score=330, Evalue=1e-91, Organism=Escherichia coli, GI1787994, Length=100, Percent_Identity=31, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17544584, Length=429, Percent_Identity=40.7925407925408, Blast_Score=317, Evalue=1e-86, Organism=Caenorhabditis elegans, GI17506829, Length=486, Percent_Identity=40.9465020576132, Blast_Score=315, Evalue=5e-86, Organism=Caenorhabditis elegans, GI71984413, Length=486, Percent_Identity=40.9465020576132, Blast_Score=315, Evalue=7e-86, Organism=Caenorhabditis elegans, GI71984406, Length=486, Percent_Identity=40.9465020576132, Blast_Score=314, Evalue=7e-86, Organism=Caenorhabditis elegans, GI17506831, Length=486, Percent_Identity=40.9465020576132, Blast_Score=313, Evalue=1e-85, Organism=Saccharomyces cerevisiae, GI6319279, Length=481, Percent_Identity=38.6694386694387, Blast_Score=298, Evalue=1e-81, Organism=Saccharomyces cerevisiae, GI6324923, Length=490, Percent_Identity=37.1428571428571, Blast_Score=283, Evalue=5e-77, Organism=Drosophila melanogaster, GI24648964, Length=500, Percent_Identity=38.2, Blast_Score=315, Evalue=5e-86, Organism=Drosophila melanogaster, GI28571814, Length=500, Percent_Identity=38.2, Blast_Score=315, Evalue=6e-86, Organism=Drosophila melanogaster, GI24648966, Length=410, Percent_Identity=40.2439024390244, Blast_Score=291, Evalue=8e-79, Organism=Drosophila melanogaster, GI24581235, Length=502, Percent_Identity=34.0637450199203, Blast_Score=270, Evalue=3e-72, Organism=Drosophila melanogaster, GI24646914, Length=269, Percent_Identity=42.0074349442379, Blast_Score=191, Evalue=1e-48,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 64894; Mature: 64894
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVSAMFQVPLMAQIDLTRRTKIVATIGPATESAERIRELVEVGATTFRLNFSHGDHDEH CEEECHHCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHH AKRISTIRQVSDELGMHIGILQDLQGPKIRLGRFDKGPITLANGDSFALTSKQVQCNQSV HHHHHHHHHHHHHHCCEEEHHHHCCCCCEEECCCCCCCEEEECCCCEEEECCHHCCCCCE ATVTYDKLADEVTTGSRILLDDGRVEMKVLKIDQSEQTLHCIVTVGGVLSNNKGVNFPDV EEEEHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCEEEEEEEECCEEECCCCCCCCCC QLSVRALTEKDRQDLAFGLQQGVDWVALSFVRNPSDMKEIRKLIRDHGHSTPVIAKIEKF EEEHHHHHHHHHHHHHHHHHHCCHHEEHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHH EAIDQIDSILPLCDGVMVARGDLGVEMPAEEVPLLQKDLIRKANSLGIPIITATQMLDSM HHHHHHHHHHHHHCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEHHHHHHHHH ASSPRPTRAEVSDVANAILDGTDAVMLSNETAVGDYPVEAVQTMATIARRIERDYPQRPI HCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH ETYLASTISNAISSAVSSIASHLNAAAIVPLTESGATAHNVSKFRPAAPILAVTNKLAVA HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHH RKLQLAWGVTPLLVPTQKSTTATFSDAIAVAQELGLLKEGDLTIQTAGTLAGVSGSTDLV HHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCEECCCCCCHHH KVGIVSAVLGQGIGIGNGTVSGKVRFAFSPNDSTKIEPGEILVIHETSDDYLDAIRKSAG HHHHHHHHHHCCCCCCCCEECCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHCC VITEQEGEEYHAEMISKRLGIPFIIGIAHATRNLLEGEVVTMQLSNGKVHRGTGGKLPMK CCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCEE LDSMD ECCCC >Mature Secondary Structure MVVSAMFQVPLMAQIDLTRRTKIVATIGPATESAERIRELVEVGATTFRLNFSHGDHDEH CEEECHHCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHH AKRISTIRQVSDELGMHIGILQDLQGPKIRLGRFDKGPITLANGDSFALTSKQVQCNQSV HHHHHHHHHHHHHHCCEEEHHHHCCCCCEEECCCCCCCEEEECCCCEEEECCHHCCCCCE ATVTYDKLADEVTTGSRILLDDGRVEMKVLKIDQSEQTLHCIVTVGGVLSNNKGVNFPDV EEEEHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCEEEEEEEECCEEECCCCCCCCCC QLSVRALTEKDRQDLAFGLQQGVDWVALSFVRNPSDMKEIRKLIRDHGHSTPVIAKIEKF EEEHHHHHHHHHHHHHHHHHHCCHHEEHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHH EAIDQIDSILPLCDGVMVARGDLGVEMPAEEVPLLQKDLIRKANSLGIPIITATQMLDSM HHHHHHHHHHHHHCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEHHHHHHHHH ASSPRPTRAEVSDVANAILDGTDAVMLSNETAVGDYPVEAVQTMATIARRIERDYPQRPI HCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH ETYLASTISNAISSAVSSIASHLNAAAIVPLTESGATAHNVSKFRPAAPILAVTNKLAVA HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHH RKLQLAWGVTPLLVPTQKSTTATFSDAIAVAQELGLLKEGDLTIQTAGTLAGVSGSTDLV HHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCEECCCCCCHHH KVGIVSAVLGQGIGIGNGTVSGKVRFAFSPNDSTKIEPGEILVIHETSDDYLDAIRKSAG HHHHHHHHHHCCCCCCCCEECCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHCC VITEQEGEEYHAEMISKRLGIPFIIGIAHATRNLLEGEVVTMQLSNGKVHRGTGGKLPMK CCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCEE LDSMD ECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]