Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
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Accession | NC_005071 |
Length | 2,410,873 |
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The map label for this gene is yggT [C]
Identifier: 33862954
GI number: 33862954
Start: 738257
End: 738556
Strand: Reverse
Name: yggT [C]
Synonym: PMT0682
Alternate gene names: 33862954
Gene position: 738556-738257 (Counterclockwise)
Preceding gene: 33862955
Following gene: 33862951
Centisome position: 30.63
GC content: 50.33
Gene sequence:
>300_bases ATGCAAATCCTGGCCACGTTGCTACAGGTACTAGCCCAGACACTTGAGATCTACTCACTAGTGCTTATCGTGCGCGTGCT GCTGAGCTGGTTCCCTAATCTGGACTGGGCGAATCCAGTACTGAGCACCGTTAGCTCAATCACAGATCCCTACCTCAATG CTTTTCGTGGCTTGATTCCTCCCCTTGGAGGCTTGGATCTCTCAGCGATCCTGGCGTTAGTAGCCCTGAGTCTTCTGCAA CAAATGCTGAATACTGCAAGTGTGGCGATCTTGAATAGTGGAATGAGCTATTACAGCTGA
Upstream 100 bases:
>100_bases TCTCTGAAAAGTTCCATCGAACCTTCTCAGTACTTCCTGATTTAGGTTCAGCCGAACCTTCTCAGGTTGCATAGAGTTCT AAGAATAGTTGTCTTCACCC
Downstream 100 bases:
>100_bases TCTAGCGGTTGTTTCGAAGGGGTCACTGCCTTGGTTCCCCATAAAAGACCAGGGTCTACAGCCTGTTCAAGCGGAAGCAG CTCATCATCGTCTCCAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MQILATLLQVLAQTLEIYSLVLIVRVLLSWFPNLDWANPVLSTVSSITDPYLNAFRGLIPPLGGLDLSAILALVALSLLQ QMLNTASVAILNSGMSYYS
Sequences:
>Translated_99_residues MQILATLLQVLAQTLEIYSLVLIVRVLLSWFPNLDWANPVLSTVSSITDPYLNAFRGLIPPLGGLDLSAILALVALSLLQ QMLNTASVAILNSGMSYYS >Mature_99_residues MQILATLLQVLAQTLEIYSLVLIVRVLLSWFPNLDWANPVLSTVSSITDPYLNAFRGLIPPLGGLDLSAILALVALSLLQ QMLNTASVAILNSGMSYYS
Specific function: Unknown
COG id: COG0762
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10734; Mature: 10734
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQILATLLQVLAQTLEIYSLVLIVRVLLSWFPNLDWANPVLSTVSSITDPYLNAFRGLIP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC PLGGLDLSAILALVALSLLQQMLNTASVAILNSGMSYYS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure MQILATLLQVLAQTLEIYSLVLIVRVLLSWFPNLDWANPVLSTVSSITDPYLNAFRGLIP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC PLGGLDLSAILALVALSLLQQMLNTASVAILNSGMSYYS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA