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The map label for this gene is 33862879

Identifier: 33862879

GI number: 33862879

Start: 663466

End: 664182

Strand: Direct

Name: 33862879

Synonym: PMT0606

Alternate gene names: NA

Gene position: 663466-664182 (Clockwise)

Preceding gene: 33862874

Following gene: 33862880

Centisome position: 27.52

GC content: 54.67

Gene sequence:

>717_bases
ATGATCTCCGGTCCCCCCCCCTCCACCAACCAGAGCGTTGAAGAACTACTGGAACGATTCACCAGTGGTTCAAAGCGTCA
ACGGCTCAGCTTGGTGCCAACGATTGAAGAACGGGCAGAAGAGCTGGCTGCATTAGCTCAAGCAGCTCTTGCCTCTTTTG
ACCCAGACGGAGACGACTGGGCTGCAGGATGGATTCTGCAAGTTTTTCAGCGTCATCAGCCGCAGGTTTTACCCAGCCTG
TTGAGCAGTGAGTCGAGTGGCTGGTTCTCGACCCCATCAGCAGTGGGGATCGACTATGAGCCTTTGCAACGTGACCTACT
AGCCGAAAACTTTGAGGAGGCTGATCGCTTCACCAGTGCAACGCTGCGCAAGCTCGCAGGACCTGGAGCCGAGCAGCGCG
GTTATGTGTACTTCAGTGAGGTGCATGCGATCAATGGCCTCGACCTGGTCACAATCGATCGTCTCTGGACTGCCTATTCA
CAAGGAAGGTTTGGGTTTACGACCCAAGCGCGCTTGCTGAACGCTCTCGATGGCAGGTATCACAGCCTTTGGGCTCGTAT
TGGATGGAAACAGGATGGAACATGGACACGTTATCCAGGCTCCTTTACCTGGTCTCTCTCTGCCCCTGAGGGGCATATGC
CTTTAATTAATCAGTTACGGGGTGTGCGCTTAATGGATGCGGTGCTGCATCATCCATCACTTGCAGCCCGCCGTTAG

Upstream 100 bases:

>100_bases
GACCATTGGCCTGACGGAATCTTTCGATCGAGTAAGGAGTATGGGTACCCATTCCTGACATAGTGGGCCAGCGGCGAGCC
AGAAGAGCCGGTTTCGATCC

Downstream 100 bases:

>100_bases
AGCAGATTTCAGCTTGAGGCACCGGCCTAGAGCACGCGAACGGTTATGGTCAAAACAGGTCTGAATGGTCCTGATGCCTT
CCTGGTCACGGGCAGCTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MISGPPPSTNQSVEELLERFTSGSKRQRLSLVPTIEERAEELAALAQAALASFDPDGDDWAAGWILQVFQRHQPQVLPSL
LSSESSGWFSTPSAVGIDYEPLQRDLLAENFEEADRFTSATLRKLAGPGAEQRGYVYFSEVHAINGLDLVTIDRLWTAYS
QGRFGFTTQARLLNALDGRYHSLWARIGWKQDGTWTRYPGSFTWSLSAPEGHMPLINQLRGVRLMDAVLHHPSLAARR

Sequences:

>Translated_238_residues
MISGPPPSTNQSVEELLERFTSGSKRQRLSLVPTIEERAEELAALAQAALASFDPDGDDWAAGWILQVFQRHQPQVLPSL
LSSESSGWFSTPSAVGIDYEPLQRDLLAENFEEADRFTSATLRKLAGPGAEQRGYVYFSEVHAINGLDLVTIDRLWTAYS
QGRFGFTTQARLLNALDGRYHSLWARIGWKQDGTWTRYPGSFTWSLSAPEGHMPLINQLRGVRLMDAVLHHPSLAARR
>Mature_238_residues
MISGPPPSTNQSVEELLERFTSGSKRQRLSLVPTIEERAEELAALAQAALASFDPDGDDWAAGWILQVFQRHQPQVLPSL
LSSESSGWFSTPSAVGIDYEPLQRDLLAENFEEADRFTSATLRKLAGPGAEQRGYVYFSEVHAINGLDLVTIDRLWTAYS
QGRFGFTTQARLLNALDGRYHSLWARIGWKQDGTWTRYPGSFTWSLSAPEGHMPLINQLRGVRLMDAVLHHPSLAARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf53 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016024
- InterPro:   IPR008629 [H]

Pfam domain/function: PF05419 GUN4 [H]

EC number: NA

Molecular weight: Translated: 26582; Mature: 26582

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGPPPSTNQSVEELLERFTSGSKRQRLSLVPTIEERAEELAALAQAALASFDPDGDDW
CCCCCCCCCCHHHHHHHHHHHCCCCHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHH
AAGWILQVFQRHQPQVLPSLLSSESSGWFSTPSAVGIDYEPLQRDLLAENFEEADRFTSA
HHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TLRKLAGPGAEQRGYVYFSEVHAINGLDLVTIDRLWTAYSQGRFGFTTQARLLNALDGRY
HHHHHHCCCCCCCCEEEEEHHHHCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH
HSLWARIGWKQDGTWTRYPGSFTWSLSAPEGHMPLINQLRGVRLMDAVLHHPSLAARR
HHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MISGPPPSTNQSVEELLERFTSGSKRQRLSLVPTIEERAEELAALAQAALASFDPDGDDW
CCCCCCCCCCHHHHHHHHHHHCCCCHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHH
AAGWILQVFQRHQPQVLPSLLSSESSGWFSTPSAVGIDYEPLQRDLLAENFEEADRFTSA
HHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TLRKLAGPGAEQRGYVYFSEVHAINGLDLVTIDRLWTAYSQGRFGFTTQARLLNALDGRY
HHHHHHCCCCCCCCEEEEEHHHHCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH
HSLWARIGWKQDGTWTRYPGSFTWSLSAPEGHMPLINQLRGVRLMDAVLHHPSLAARR
HHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]