Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
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Accession | NC_005071 |
Length | 2,410,873 |
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The map label for this gene is 33862880
Identifier: 33862880
GI number: 33862880
Start: 664247
End: 664717
Strand: Direct
Name: 33862880
Synonym: PMT0607
Alternate gene names: NA
Gene position: 664247-664717 (Clockwise)
Preceding gene: 33862879
Following gene: 33862883
Centisome position: 27.55
GC content: 52.87
Gene sequence:
>471_bases ATGGTCCTGATGCCTTCCTGGTCACGGGCAGCTTCTAGGCTTTTATTCAGCGTTAGCCCCCAGGGGGTGGCCCCGCTGTT TCGTTGGGCTGATTTCATTCTTCCTTCAACCTTGCAGCTCACTCCTTTGCTGGAGATCCTGCTTGAACCTGTTGCCTGTC AGGACACCAGCTATCGCCTACAGCTGGGATTGCAGGAGGCCTTGGTGAACGCAGTGCAACATGGTAATTGCGGAGATCCA GGCAAATCCCTGCGAGTTCGTCGAATCTTTACGCCTAACTGGATGATTTGGCAGATCCAGGATGAAGGGATCGGTGTACC ACTCAAAGCTCGAGTTGGTTGCCTTCCAGCTCAACTCGAGGCCAATAGTGGACGTGGAATGTTTCTGATTTATCAGTGTT TTGATGATGTGCGCTGGAGCCAGCGCGGCAATCGCTTACAACTAGCCTGTCGACGTCCCAAAAGCAGTTGA
Upstream 100 bases:
>100_bases GTGCTGCATCATCCATCACTTGCAGCCCGCCGTTAGAGCAGATTTCAGCTTGAGGCACCGGCCTAGAGCACGCGAACGGT TATGGTCAAAACAGGTCTGA
Downstream 100 bases:
>100_bases GACTGCTGACAGCGTAAAAACTTGAATACTATTAATCATAAGAGCTAATGATTAGAAGCGAAGCGAGGTGCATTTTGAGG TGCATTTGCCTTTTAATTTA
Product: anti-sigma regulatory factor (Ser/Thr protein kinase)
Products: NA
Alternate protein names: PmgA Protein; Photomixotrophic Growth Related Protein PmgA-Like Protein; Photomixotrophic Growth-Like Protein PmgA; Photomixotrophic Growth Related Protein
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MVLMPSWSRAASRLLFSVSPQGVAPLFRWADFILPSTLQLTPLLEILLEPVACQDTSYRLQLGLQEALVNAVQHGNCGDP GKSLRVRRIFTPNWMIWQIQDEGIGVPLKARVGCLPAQLEANSGRGMFLIYQCFDDVRWSQRGNRLQLACRRPKSS
Sequences:
>Translated_156_residues MVLMPSWSRAASRLLFSVSPQGVAPLFRWADFILPSTLQLTPLLEILLEPVACQDTSYRLQLGLQEALVNAVQHGNCGDP GKSLRVRRIFTPNWMIWQIQDEGIGVPLKARVGCLPAQLEANSGRGMFLIYQCFDDVRWSQRGNRLQLACRRPKSS >Mature_156_residues MVLMPSWSRAASRLLFSVSPQGVAPLFRWADFILPSTLQLTPLLEILLEPVACQDTSYRLQLGLQEALVNAVQHGNCGDP GKSLRVRRIFTPNWMIWQIQDEGIGVPLKARVGCLPAQLEANSGRGMFLIYQCFDDVRWSQRGNRLQLACRRPKSS
Specific function: Unknown
COG id: COG2172
COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17552; Mature: 17552
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLMPSWSRAASRLLFSVSPQGVAPLFRWADFILPSTLQLTPLLEILLEPVACQDTSYRL CEECCCHHHHHHHEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEE QLGLQEALVNAVQHGNCGDPGKSLRVRRIFTPNWMIWQIQDEGIGVPLKARVGCLPAQLE EECHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCHHHHCCCCCCEEE ANSGRGMFLIYQCFDDVRWSQRGNRLQLACRRPKSS CCCCCCEEEEEEHHHHHHHHHCCCEEEEEECCCCCC >Mature Secondary Structure MVLMPSWSRAASRLLFSVSPQGVAPLFRWADFILPSTLQLTPLLEILLEPVACQDTSYRL CEECCCHHHHHHHEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEE QLGLQEALVNAVQHGNCGDPGKSLRVRRIFTPNWMIWQIQDEGIGVPLKARVGCLPAQLE EECHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCHHHHCCCCCCEEE ANSGRGMFLIYQCFDDVRWSQRGNRLQLACRRPKSS CCCCCCEEEEEEHHHHHHHHHCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA