| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862817
Identifier: 33862817
GI number: 33862817
Start: 597269
End: 597709
Strand: Direct
Name: 33862817
Synonym: PMT0544
Alternate gene names: NA
Gene position: 597269-597709 (Clockwise)
Preceding gene: 33862815
Following gene: 33862819
Centisome position: 24.77
GC content: 46.49
Gene sequence:
>441_bases GTGCCACAATGGCTGAGGTTCCTTTGCGCAGGGTGTCCCGCATTGTCAGTCGAGAAGCCCATTGAGCCAAGCACTGTGAT GCAGTTTCAGACCGAGAAATTGCGTAGAACAATCCAGGAGTGTCAGGATGTTGACACCCTACGTGGCATCGCAATGCAAT TGTTGCAACTTCACGAGAAAAAAAGCGCAATTGCAGAGTGGGCAACAAAAAAGGGAGTTGATGCTGAATGTCGAGCACTT GTGGCCGAGATGGGTAACAACAACAAGCTGGCCAACACTTTTCAAATAATACGAAGTGACGGCCAATCAGATGAGATCGC TGGTAGGCATTTTTCCAGCTATGACGAGGCACATACTGTCTTGGAAAGATATTATGCTGATCTCAGCTGTTGCGATGAGG ATGAAAGAGAATACTATGACATTGTTGAGGTAAATAGCTAA
Upstream 100 bases:
>100_bases AGGTGTATTTGCTCGTAAATTCTTTGTTGGTAATAATCAAAGCCGATTTTTTACGAGCTTGCCTATATGCCGATGTTTCT ATGCATGCAAGTACAAGTAG
Downstream 100 bases:
>100_bases GGGATGATGCCTAAGCCACCCCTTATCATTATTTCAAATGGAAGTATTTACCTAAAACAAGAAAGGAAATTCAGCATCCC ATCTTCCTTGTTGATCTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MPQWLRFLCAGCPALSVEKPIEPSTVMQFQTEKLRRTIQECQDVDTLRGIAMQLLQLHEKKSAIAEWATKKGVDAECRAL VAEMGNNNKLANTFQIIRSDGQSDEIAGRHFSSYDEAHTVLERYYADLSCCDEDEREYYDIVEVNS
Sequences:
>Translated_146_residues MPQWLRFLCAGCPALSVEKPIEPSTVMQFQTEKLRRTIQECQDVDTLRGIAMQLLQLHEKKSAIAEWATKKGVDAECRAL VAEMGNNNKLANTFQIIRSDGQSDEIAGRHFSSYDEAHTVLERYYADLSCCDEDEREYYDIVEVNS >Mature_145_residues PQWLRFLCAGCPALSVEKPIEPSTVMQFQTEKLRRTIQECQDVDTLRGIAMQLLQLHEKKSAIAEWATKKGVDAECRALV AEMGNNNKLANTFQIIRSDGQSDEIAGRHFSSYDEAHTVLERYYADLSCCDEDEREYYDIVEVNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16667; Mature: 16536
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQWLRFLCAGCPALSVEKPIEPSTVMQFQTEKLRRTIQECQDVDTLRGIAMQLLQLHEK CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSAIAEWATKKGVDAECRALVAEMGNNNKLANTFQIIRSDGQSDEIAGRHFSSYDEAHTV HHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHH LERYYADLSCCDEDEREYYDIVEVNS HHHHHHHHHCCCCCHHHHHHHHEECC >Mature Secondary Structure PQWLRFLCAGCPALSVEKPIEPSTVMQFQTEKLRRTIQECQDVDTLRGIAMQLLQLHEK CHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSAIAEWATKKGVDAECRALVAEMGNNNKLANTFQIIRSDGQSDEIAGRHFSSYDEAHTV HHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHH LERYYADLSCCDEDEREYYDIVEVNS HHHHHHHHHCCCCCHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA