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The map label for this gene is 33862819

Identifier: 33862819

GI number: 33862819

Start: 600395

End: 601174

Strand: Direct

Name: 33862819

Synonym: PMT0546

Alternate gene names: NA

Gene position: 600395-601174 (Clockwise)

Preceding gene: 33862817

Following gene: 33862820

Centisome position: 24.9

GC content: 45.0

Gene sequence:

>780_bases
ATGACCTCACCGCAAAGTCGAAGCTTGCTAAGCAAGTGTACTGATAATACTTGGCAGCTGCTGCGACGCACTCCACCAAT
GGTCTTTGCAACTGCTGTTTTCGTTTGCGGCATCGTCGCGGCATCTTCAATCTTAGTGAAAGGAATTCGCAGTAGTAATG
ACACAATTACTGTCACCGGAGCCAGTACGGAGCGGATTACGAGCGACTATGTCGATTGGTCTGTAAATGTTAAACAAACT
GGGTACAACCAGCAGACTTCCTATCAGCTGCTAAAACCATCGTTAGAAAAAACGATTGTCTTTCTAAAAGCTAATGGGGT
CAAGCCTGATGAGATAGAATTAGGAACTGTTAGGTCTAATAAAGATCAAGTTCGCAACCCAAAAACGGGAGAACTTCTAT
CAACAACTTGGACGACAACTCAAGCTGTTCTGATCGGAAGTTGGGATGTTAAAAAAATCCACATGATTTCAGGAAAGATC
AGTGCCCTAATTGGTGAAGGGGTACCTCTTTCAATTAATCGACCCTCCTACACTTTTACAAAGCTTGCAGCCAAGCGAGT
TGACATGCTCGCAAAAGCTACTCGTGATGCACGGAAACGTGCAAAGGCTATTGCCCAGGAAGCAGGCTCGAGTATTGGCG
CAATTACCAACGCCGATACCGGCACATTCCAGATCACAGTGCCTAACTCTACACAAATGAGTAGTTATGGATCATACGAC
ACCAGCACAATCAAAAAAGACATCACCGCGGTTATGGGGGTAACATTTAGGGTTGAATGA

Upstream 100 bases:

>100_bases
ATCAACATTCTCGTGCAAGTCTAACAAGGTTAATTTAACAGAAAATTGACTAGCCATTGGCACGAAAATCACTAGAATTC
CTCAATAGAGTCAGCCAGTC

Downstream 100 bases:

>100_bases
AGACTGAATAAGTCTATAGAGTTGAGGTTTTATCTTATTAATAATACGATTGCTGATTATACTAAAATGAGTAATTCCAT
GGATTGTGCTAATACATTGC

Product: periplasmic protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTSPQSRSLLSKCTDNTWQLLRRTPPMVFATAVFVCGIVAASSILVKGIRSSNDTITVTGASTERITSDYVDWSVNVKQT
GYNQQTSYQLLKPSLEKTIVFLKANGVKPDEIELGTVRSNKDQVRNPKTGELLSTTWTTTQAVLIGSWDVKKIHMISGKI
SALIGEGVPLSINRPSYTFTKLAAKRVDMLAKATRDARKRAKAIAQEAGSSIGAITNADTGTFQITVPNSTQMSSYGSYD
TSTIKKDITAVMGVTFRVE

Sequences:

>Translated_259_residues
MTSPQSRSLLSKCTDNTWQLLRRTPPMVFATAVFVCGIVAASSILVKGIRSSNDTITVTGASTERITSDYVDWSVNVKQT
GYNQQTSYQLLKPSLEKTIVFLKANGVKPDEIELGTVRSNKDQVRNPKTGELLSTTWTTTQAVLIGSWDVKKIHMISGKI
SALIGEGVPLSINRPSYTFTKLAAKRVDMLAKATRDARKRAKAIAQEAGSSIGAITNADTGTFQITVPNSTQMSSYGSYD
TSTIKKDITAVMGVTFRVE
>Mature_258_residues
TSPQSRSLLSKCTDNTWQLLRRTPPMVFATAVFVCGIVAASSILVKGIRSSNDTITVTGASTERITSDYVDWSVNVKQTG
YNQQTSYQLLKPSLEKTIVFLKANGVKPDEIELGTVRSNKDQVRNPKTGELLSTTWTTTQAVLIGSWDVKKIHMISGKIS
ALIGEGVPLSINRPSYTFTKLAAKRVDMLAKATRDARKRAKAIAQEAGSSIGAITNADTGTFQITVPNSTQMSSYGSYDT
STIKKDITAVMGVTFRVE

Specific function: Unknown

COG id: COG2859

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28136; Mature: 28005

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPQSRSLLSKCTDNTWQLLRRTPPMVFATAVFVCGIVAASSILVKGIRSSNDTITVTG
CCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
ASTERITSDYVDWSVNVKQTGYNQQTSYQLLKPSLEKTIVFLKANGVKPDEIELGTVRSN
CCHHHHHHHHCCEEEEEEECCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECC
KDQVRNPKTGELLSTTWTTTQAVLIGSWDVKKIHMISGKISALIGEGVPLSINRPSYTFT
HHHCCCCCCCCEEEEEECCEEEEEEECCCCEEEEEECCHHHHHHCCCCEEEECCCCCHHH
KLAAKRVDMLAKATRDARKRAKAIAQEAGSSIGAITNADTGTFQITVPNSTQMSSYGSYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEECCCCCCCCCCCCC
TSTIKKDITAVMGVTFRVE
HHHHHHHHHHHHCEEEEEC
>Mature Secondary Structure 
TSPQSRSLLSKCTDNTWQLLRRTPPMVFATAVFVCGIVAASSILVKGIRSSNDTITVTG
CCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
ASTERITSDYVDWSVNVKQTGYNQQTSYQLLKPSLEKTIVFLKANGVKPDEIELGTVRSN
CCHHHHHHHHCCEEEEEEECCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECC
KDQVRNPKTGELLSTTWTTTQAVLIGSWDVKKIHMISGKISALIGEGVPLSINRPSYTFT
HHHCCCCCCCCEEEEEECCEEEEEEECCCCEEEEEECCHHHHHHCCCCEEEECCCCCHHH
KLAAKRVDMLAKATRDARKRAKAIAQEAGSSIGAITNADTGTFQITVPNSTQMSSYGSYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEECCCCCCCCCCCCC
TSTIKKDITAVMGVTFRVE
HHHHHHHHHHHHCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA