Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
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Accession | NC_005071 |
Length | 2,410,873 |
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The map label for this gene is 33862380
Identifier: 33862380
GI number: 33862380
Start: 122194
End: 123066
Strand: Reverse
Name: 33862380
Synonym: PMT0107
Alternate gene names: NA
Gene position: 123066-122194 (Counterclockwise)
Preceding gene: 33862381
Following gene: 33862360
Centisome position: 5.1
GC content: 37.23
Gene sequence:
>873_bases ATGAAAGTACCTGAAAGTCTCAACTTAATTCCAAAGTACTATGCACCATCATCATGGTGGCAACATGTACCAATTGCACA CTGGCTGGTAGAGAATCTTAAACCAGAGAAGATTGTAGAGTTGGGATCGCATTACGGCATATCATTCTTCGCCTTCTGTG AAGCTGCGAGCCAATTTTCTGATAATACATATACATATGCGATTGATACTTGGGAAGGAGATGAGCAAGCGGGCTATTAT GATGATGATGTCTTTAATAAAGTTACAAAAGAGCAACAAGAATATCATAGGTTACGAAGTACACTTATAAGAGATAGTTT TGACAACGCATTAGAATATTTCCCGAACGATTCAATTGATTTGATTCATATAGATGGTCTTCATACATATGAAGCCGTAA AACACGATTTTTTATCATGGCTACCGAAGGTAAAAGAGGGTGGGACATTAATGTTTCATGATTGGAATGTACGGAGAAGA GATTTTGGCGTATGGAAACTATGGGAAGAAATAAAAGAAGATATTAATTTTAAATGCATTGAGACACCGAATGGACATGG ATTAGGGATAGCAACTAAGTCAAGTCGAGAGCCAGAATGGCACAAAGAGCTAATGGCTATTTTACCTGCACTTGCAACCA AAGGTTTTCTCCTTGAAAGTTTAGCTGACAACAAAGATAAGCTCAAAGACTTACTAGAGGAAACCAAAATTAGTCAAAAG CATGCACAAAACTTAGAGCATATTAATCGAGAGCAAAAAGTAGAGATAGGCAAGTTAAAAGAAATGTTTTATGACCAGCA AAAACGTCTGTTTAACATAAGAGCCTTGAAAGAATGCTGGTTGGGCAAAGCACTTCTGGCAACAAGAATCTAA
Upstream 100 bases:
>100_bases ACTGGATGAATGATGCCTTATTACTGAGGTCGCAATGCACTAGCATTGCTGCTGGTTTAGCAGGTGTACCAATGCATTCG ATAAGCATCGAAATAGAAAA
Downstream 100 bases:
>100_bases TTAGAAGAAAATAGCAGTATAAGGTCAAAGAATATAAAAGCATTGACAGCAAAAGATCGCTGTAATGCAAGAGGATTGAT AAAGGCATAAATATAAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKVPESLNLIPKYYAPSSWWQHVPIAHWLVENLKPEKIVELGSHYGISFFAFCEAASQFSDNTYTYAIDTWEGDEQAGYY DDDVFNKVTKEQQEYHRLRSTLIRDSFDNALEYFPNDSIDLIHIDGLHTYEAVKHDFLSWLPKVKEGGTLMFHDWNVRRR DFGVWKLWEEIKEDINFKCIETPNGHGLGIATKSSREPEWHKELMAILPALATKGFLLESLADNKDKLKDLLEETKISQK HAQNLEHINREQKVEIGKLKEMFYDQQKRLFNIRALKECWLGKALLATRI
Sequences:
>Translated_290_residues MKVPESLNLIPKYYAPSSWWQHVPIAHWLVENLKPEKIVELGSHYGISFFAFCEAASQFSDNTYTYAIDTWEGDEQAGYY DDDVFNKVTKEQQEYHRLRSTLIRDSFDNALEYFPNDSIDLIHIDGLHTYEAVKHDFLSWLPKVKEGGTLMFHDWNVRRR DFGVWKLWEEIKEDINFKCIETPNGHGLGIATKSSREPEWHKELMAILPALATKGFLLESLADNKDKLKDLLEETKISQK HAQNLEHINREQKVEIGKLKEMFYDQQKRLFNIRALKECWLGKALLATRI >Mature_290_residues MKVPESLNLIPKYYAPSSWWQHVPIAHWLVENLKPEKIVELGSHYGISFFAFCEAASQFSDNTYTYAIDTWEGDEQAGYY DDDVFNKVTKEQQEYHRLRSTLIRDSFDNALEYFPNDSIDLIHIDGLHTYEAVKHDFLSWLPKVKEGGTLMFHDWNVRRR DFGVWKLWEEIKEDINFKCIETPNGHGLGIATKSSREPEWHKELMAILPALATKGFLLESLADNKDKLKDLLEETKISQK HAQNLEHINREQKVEIGKLKEMFYDQQKRLFNIRALKECWLGKALLATRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 34021; Mature: 34021
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVPESLNLIPKYYAPSSWWQHVPIAHWLVENLKPEKIVELGSHYGISFFAFCEAASQFS CCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCC DNTYTYAIDTWEGDEQAGYYDDDVFNKVTKEQQEYHRLRSTLIRDSFDNALEYFPNDSID CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LIHIDGLHTYEAVKHDFLSWLPKVKEGGTLMFHDWNVRRRDFGVWKLWEEIKEDINFKCI EEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEE ETPNGHGLGIATKSSREPEWHKELMAILPALATKGFLLESLADNKDKLKDLLEETKISQK ECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH HAQNLEHINREQKVEIGKLKEMFYDQQKRLFNIRALKECWLGKALLATRI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVPESLNLIPKYYAPSSWWQHVPIAHWLVENLKPEKIVELGSHYGISFFAFCEAASQFS CCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCC DNTYTYAIDTWEGDEQAGYYDDDVFNKVTKEQQEYHRLRSTLIRDSFDNALEYFPNDSID CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LIHIDGLHTYEAVKHDFLSWLPKVKEGGTLMFHDWNVRRRDFGVWKLWEEIKEDINFKCI EEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEE ETPNGHGLGIATKSSREPEWHKELMAILPALATKGFLLESLADNKDKLKDLLEETKISQK ECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH HAQNLEHINREQKVEIGKLKEMFYDQQKRLFNIRALKECWLGKALLATRI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]