Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
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Accession | NC_005071 |
Length | 2,410,873 |
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The map label for this gene is wxcX [H]
Identifier: 33862360
GI number: 33862360
Start: 94522
End: 96738
Strand: Reverse
Name: wxcX [H]
Synonym: PMT0087
Alternate gene names: 33862360
Gene position: 96738-94522 (Counterclockwise)
Preceding gene: 33862380
Following gene: 33862355
Centisome position: 4.01
GC content: 40.05
Gene sequence:
>2217_bases ATGCGCAGACGGGCGGGCGAAAAAAAAATCAATCATTTAAAACCAACTGTAGTCGTAGTAAGCCATGATGCATCGGAAAC AGGAGCGCCTATTCTTGCATTGAATATTTGTCAAGAGCTGAGTAAAAATGCAAACATAATTATCATATTACCGCGAGGTG GTGCACTATTGAAGGAATTCCTAAAAAATTCATCATGTGTACTTCGGCCGAGATTAGGAGTCATATTTTCAAGCCTTCTG CGACGTGAGTTTAAACGTTTGCCAGGAGAAAAATTGCCTGAATACGCAATTGTAAATTCCGTTGTTTCAGCAGGGTGCAT TCAACCTTTAAGAGCATTAGGGATTCCCACAACAACACTAATTCACGAATTTAGTGCTTATATTCGCCCAATCGGCATTC TAGATAATGTAGCTAAATGGTCCAATCGAGTTGTTTTTTCAAGTCCGCTAACGCGTGATGACATTCTAAGCAGCTGTCCA CAATTTAACAATGCTTCAATTAAGGTCTTGCCACAGGGGCCTTGCAAAAGACCGGGCAACTCAAATCAGGCTAAGTTAAA GAATAAAAAAATTGACGATGCTTGGAATTTTCTTGAGAATTTAGATAGTAACTCAATTTTGATCCTCGCGGCAGGGGCAA TTCAACCTCGCAAAGGTGTTGACTTATTTATTGCGGTTGCAGATGAACTGCGCAAGAAGTGTAAACATATGCCTTTACAA TTTGCTTGGATAGGTAGCGGATACGATCCAGTACACGATTTTAATGTGTCTTTATGGGTTGAGGATCAAATACATCGCTC AGGATTAAACGGTGAACTACGCATTCTTGATCACTCTAGTGCTTATAACAGACTGATGAATAGAGCCGATATTTTTTTAG TTACTTCAAGACTGGACCCTCTACCTAATGTGGCCATTGATGCCATGCTGGCTGGCAAACCAATGCTTTGCTTTGAGAAA GCATGTGGAATGGCCAATTTGTTACTTGAAGATCCAATTCTTGGGAATGCTCTAGTAGCTTCTTACCTAAACACTTCGAG CATGGCTGAAAAAGCAGCCAATCTTGTAAACGGGTACGAACAAAGACAATTGATAGCGAAGAGGAGCAAGGAAAAAGCGC AAGAATGGTTTAACATGTCTCACTACATAAAAGAACTGAAATCAATAGCCGAAGAAACAGTAAAAGAAGAAAAAATACTG AAAGAAGAATTTAAAATTCTTGCTTCTAAAAGAATTATAGATCAGGAATTTTGTTTTAAGAATAGTAAGCTCTCAAAGCG ATCTGAAATTCTCCATTATTTAGTGTCATGGCGCAATGAAGTTTGGCCAAGAAAGCCTTTCCCAGGTTTTCACCCAGGTA TCTACAAAGAACAAATTCTTGAAGATGCTCCTTGTCCAGATCCACTCATCCATTACCTAAAAGAAAATCAACCCAAGGGC GAATGGAATGTGCCTATGATCACTCCTGCCAGTTCTTTGCAGCAACAAGATAGCGAAACAACAATTGCTCTTCATGTGCA TGTTCACTATCCAGAACTCCTAGATACAATATTAAATGCGCTGAATTATAACAAAATAAGGCCAGACCTTTTCCTAAGTT GTACCAATCATGAAAATCATTCAGAGATCCAATGCAAATCAGCCGGAGCCAATTGTACATTAAAATCAATCATAACAACA CCTAACCGTGGCAGAGATATCGGCCCTCTCTTGACTGAAATTGGGAAAGAATTAGACACAAAGTATGAAATATATGGTCA TCTACATACAAAAAAAAGTGCTCTTCTTCCGGGGAAGCAGGGTTGCAGCTGGCGGGATTTTCTTATATCGAACTTAGTTG GAATGCAAGATATTGCTATGGCAGATCGCATTGTCACAGCACTCAAGAAAAATCCTAAATTGGGTCTTGTATTCGCTGAT GATCCAACATGTGTTGGCTGGAGTGGCAACAGAAAACACGCAGATATACTTGCCAATAAGCTCAACTTAGGTCCCTTACC AAGATGCTTTGATTTTCCGGTTGGCACAATGTTTTGGGCAAAGAAGGGAGCACTTACTGAACTTTATAACTTAAATCTTG GCTGGGAAGACTATCCTCAAGAACCTCTAGGATATGACGGCACTATCCTTCATGCCATCGAAAGGCTTTTACCAATAATA GCCGCGAAACAAGGTTTCACCTACAATCTTACCAATGTTCCAGGCGTTAACCGCTAA
Upstream 100 bases:
>100_bases TATCCGTATCAGAAGAATTTTATATACTCCTAATTCTAATGGCCAGCTTTTGGCTAAACTATTAAAGCATTTAGTTAAAC CAATTTTATTACTGGGCGGG
Downstream 100 bases:
>100_bases TGTCCTAAAATGCTTTGATGAAATCGATGAATCCCATCATTAGCGCAGACCTTCGGACTCCAGCCCAAACAATTTCTCGC TCGTTTAATACTCAAGACAT
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 738; Mature: 738
Protein sequence:
>738_residues MRRRAGEKKINHLKPTVVVVSHDASETGAPILALNICQELSKNANIIIILPRGGALLKEFLKNSSCVLRPRLGVIFSSLL RREFKRLPGEKLPEYAIVNSVVSAGCIQPLRALGIPTTTLIHEFSAYIRPIGILDNVAKWSNRVVFSSPLTRDDILSSCP QFNNASIKVLPQGPCKRPGNSNQAKLKNKKIDDAWNFLENLDSNSILILAAGAIQPRKGVDLFIAVADELRKKCKHMPLQ FAWIGSGYDPVHDFNVSLWVEDQIHRSGLNGELRILDHSSAYNRLMNRADIFLVTSRLDPLPNVAIDAMLAGKPMLCFEK ACGMANLLLEDPILGNALVASYLNTSSMAEKAANLVNGYEQRQLIAKRSKEKAQEWFNMSHYIKELKSIAEETVKEEKIL KEEFKILASKRIIDQEFCFKNSKLSKRSEILHYLVSWRNEVWPRKPFPGFHPGIYKEQILEDAPCPDPLIHYLKENQPKG EWNVPMITPASSLQQQDSETTIALHVHVHYPELLDTILNALNYNKIRPDLFLSCTNHENHSEIQCKSAGANCTLKSIITT PNRGRDIGPLLTEIGKELDTKYEIYGHLHTKKSALLPGKQGCSWRDFLISNLVGMQDIAMADRIVTALKKNPKLGLVFAD DPTCVGWSGNRKHADILANKLNLGPLPRCFDFPVGTMFWAKKGALTELYNLNLGWEDYPQEPLGYDGTILHAIERLLPII AAKQGFTYNLTNVPGVNR
Sequences:
>Translated_738_residues MRRRAGEKKINHLKPTVVVVSHDASETGAPILALNICQELSKNANIIIILPRGGALLKEFLKNSSCVLRPRLGVIFSSLL RREFKRLPGEKLPEYAIVNSVVSAGCIQPLRALGIPTTTLIHEFSAYIRPIGILDNVAKWSNRVVFSSPLTRDDILSSCP QFNNASIKVLPQGPCKRPGNSNQAKLKNKKIDDAWNFLENLDSNSILILAAGAIQPRKGVDLFIAVADELRKKCKHMPLQ FAWIGSGYDPVHDFNVSLWVEDQIHRSGLNGELRILDHSSAYNRLMNRADIFLVTSRLDPLPNVAIDAMLAGKPMLCFEK ACGMANLLLEDPILGNALVASYLNTSSMAEKAANLVNGYEQRQLIAKRSKEKAQEWFNMSHYIKELKSIAEETVKEEKIL KEEFKILASKRIIDQEFCFKNSKLSKRSEILHYLVSWRNEVWPRKPFPGFHPGIYKEQILEDAPCPDPLIHYLKENQPKG EWNVPMITPASSLQQQDSETTIALHVHVHYPELLDTILNALNYNKIRPDLFLSCTNHENHSEIQCKSAGANCTLKSIITT PNRGRDIGPLLTEIGKELDTKYEIYGHLHTKKSALLPGKQGCSWRDFLISNLVGMQDIAMADRIVTALKKNPKLGLVFAD DPTCVGWSGNRKHADILANKLNLGPLPRCFDFPVGTMFWAKKGALTELYNLNLGWEDYPQEPLGYDGTILHAIERLLPII AAKQGFTYNLTNVPGVNR >Mature_738_residues MRRRAGEKKINHLKPTVVVVSHDASETGAPILALNICQELSKNANIIIILPRGGALLKEFLKNSSCVLRPRLGVIFSSLL RREFKRLPGEKLPEYAIVNSVVSAGCIQPLRALGIPTTTLIHEFSAYIRPIGILDNVAKWSNRVVFSSPLTRDDILSSCP QFNNASIKVLPQGPCKRPGNSNQAKLKNKKIDDAWNFLENLDSNSILILAAGAIQPRKGVDLFIAVADELRKKCKHMPLQ FAWIGSGYDPVHDFNVSLWVEDQIHRSGLNGELRILDHSSAYNRLMNRADIFLVTSRLDPLPNVAIDAMLAGKPMLCFEK ACGMANLLLEDPILGNALVASYLNTSSMAEKAANLVNGYEQRQLIAKRSKEKAQEWFNMSHYIKELKSIAEETVKEEKIL KEEFKILASKRIIDQEFCFKNSKLSKRSEILHYLVSWRNEVWPRKPFPGFHPGIYKEQILEDAPCPDPLIHYLKENQPKG EWNVPMITPASSLQQQDSETTIALHVHVHYPELLDTILNALNYNKIRPDLFLSCTNHENHSEIQCKSAGANCTLKSIITT PNRGRDIGPLLTEIGKELDTKYEIYGHLHTKKSALLPGKQGCSWRDFLISNLVGMQDIAMADRIVTALKKNPKLGLVFAD DPTCVGWSGNRKHADILANKLNLGPLPRCFDFPVGTMFWAKKGALTELYNLNLGWEDYPQEPLGYDGTILHAIERLLPII AAKQGFTYNLTNVPGVNR
Specific function: Unknown
COG id: COG3754
COG function: function code M; Lipopolysaccharide biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007739 [H]
Pfam domain/function: PF05045 RgpF [H]
EC number: NA
Molecular weight: Translated: 82746; Mature: 82746
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRAGEKKINHLKPTVVVVSHDASETGAPILALNICQELSKNANIIIILPRGGALLKEF CCCCCCHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHH LKNSSCVLRPRLGVIFSSLLRREFKRLPGEKLPEYAIVNSVVSAGCIQPLRALGIPTTTL HCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH IHEFSAYIRPIGILDNVAKWSNRVVFSSPLTRDDILSSCPQFNNASIKVLPQGPCKRPGN HHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCC SNQAKLKNKKIDDAWNFLENLDSNSILILAAGAIQPRKGVDLFIAVADELRKKCKHMPLQ CCCHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHHHHCCCEE FAWIGSGYDPVHDFNVSLWVEDQIHRSGLNGELRILDHSSAYNRLMNRADIFLVTSRLDP EEEECCCCCCCCCCCEEEEEECHHHHCCCCCEEEEEECCHHHHHHHCCCCEEEEECCCCC LPNVAIDAMLAGKPMLCFEKACGMANLLLEDPILGNALVASYLNTSSMAEKAANLVNGYE CCCHHHHHHHCCCCHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH QRQLIAKRSKEKAQEWFNMSHYIKELKSIAEETVKEEKILKEEFKILASKRIIDQEFCFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NSKLSKRSEILHYLVSWRNEVWPRKPFPGFHPGIYKEQILEDAPCPDPLIHYLKENQPKG CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCC EWNVPMITPASSLQQQDSETTIALHVHVHYPELLDTILNALNYNKIRPDLFLSCTNHENH CCCCCEECCHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEECCCCCC SEIQCKSAGANCTLKSIITTPNRGRDIGPLLTEIGKELDTKYEIYGHLHTKKSALLPGKQ CEEEEECCCCCEEEHHEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCHHCCCCCC GCSWRDFLISNLVGMQDIAMADRIVTALKKNPKLGLVFADDPTCVGWSGNRKHADILANK CCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCHHHHHHHH LNLGPLPRCFDFPVGTMFWAKKGALTELYNLNLGWEDYPQEPLGYDGTILHAIERLLPII CCCCCCCCHHCCCCCHHHHHCCCCHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AAKQGFTYNLTNVPGVNR HHCCCCEEECCCCCCCCC >Mature Secondary Structure MRRRAGEKKINHLKPTVVVVSHDASETGAPILALNICQELSKNANIIIILPRGGALLKEF CCCCCCHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHH LKNSSCVLRPRLGVIFSSLLRREFKRLPGEKLPEYAIVNSVVSAGCIQPLRALGIPTTTL HCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH IHEFSAYIRPIGILDNVAKWSNRVVFSSPLTRDDILSSCPQFNNASIKVLPQGPCKRPGN HHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCC SNQAKLKNKKIDDAWNFLENLDSNSILILAAGAIQPRKGVDLFIAVADELRKKCKHMPLQ CCCHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHHHHCCCEE FAWIGSGYDPVHDFNVSLWVEDQIHRSGLNGELRILDHSSAYNRLMNRADIFLVTSRLDP EEEECCCCCCCCCCCEEEEEECHHHHCCCCCEEEEEECCHHHHHHHCCCCEEEEECCCCC LPNVAIDAMLAGKPMLCFEKACGMANLLLEDPILGNALVASYLNTSSMAEKAANLVNGYE CCCHHHHHHHCCCCHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH QRQLIAKRSKEKAQEWFNMSHYIKELKSIAEETVKEEKILKEEFKILASKRIIDQEFCFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NSKLSKRSEILHYLVSWRNEVWPRKPFPGFHPGIYKEQILEDAPCPDPLIHYLKENQPKG CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCC EWNVPMITPASSLQQQDSETTIALHVHVHYPELLDTILNALNYNKIRPDLFLSCTNHENH CCCCCEECCHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEECCCCCC SEIQCKSAGANCTLKSIITTPNRGRDIGPLLTEIGKELDTKYEIYGHLHTKKSALLPGKQ CEEEEECCCCCEEEHHEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCHHCCCCCC GCSWRDFLISNLVGMQDIAMADRIVTALKKNPKLGLVFADDPTCVGWSGNRKHADILANK CCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCHHHHHHHH LNLGPLPRCFDFPVGTMFWAKKGALTELYNLNLGWEDYPQEPLGYDGTILHAIERLLPII CCCCCCCCHHCCCCCHHHHHCCCCHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AAKQGFTYNLTNVPGVNR HHCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9385134 [H]