| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 308535179
Identifier: 308535179
GI number: 308535179
Start: 755902
End: 756672
Strand: Direct
Name: 308535179
Synonym: NA
Alternate gene names: NA
Gene position: 755902-756672 (Clockwise)
Preceding gene: 197117032
Following gene: 197117034
Centisome position: 16.38
GC content: 62.26
Gene sequence:
>771_bases TTGGGGTATAAGGGGCCATATCAGGGGCCTCCCCGGAAGCGCCTCTTCGTGGCACTGATGGGGGTGACCTGCCTCCTGGT GGTGGGGCTCATCTACCTTGGGTGGTGGATCCCGACCATGGGGCTCACCAACATCCATCCCGGCTTGCCGCGCATAGTGG GCATGGTATTCGCCGTCCTCTCCGGCATGGCGGTCCTAGGAACCCTTCTTTTGGTGCTCACCACGGCGCTCGGGAAGGAC ATCCTCGGCACCAAGTTCATGCGTGGAGTGGTGATCAAGTTCCTGCTGCCGCTCATCGAGCAGATCGGCAGCCTCTGCGG CATCTCCAAGGACACCATCCGCCAGTCCTTCGTCGCCATGAACAACTCCCTGGTCATCTCGCAACGCCTCAAGGTCAAGC CCGACCGAATCCTGATCCTGCTCCCGCACTGCCTGCAGCTCTCCCAATGCGAGATCAAGGTCACCGGCGACATCACCAAG TGCCTGCGTTGCGGCAGGTGCGACATCATGGGGCTCGCCGAACTGGCGCAGAAATACCAGGTGGAGATCTCCGTCGCCAC AGGCGGCACCCTGGCCCGCAAGGTCATCATCGAAAAGCGTCCCAAGCTGGTACTGGCCGTCGCCTGCGAGCGCGACCTCA CCTCCGGCATCAAGGACTGTTACCCCCTCCCGGTGATCGGGGTCCTGAACGATCGCCCCTACGGCCCCTGCATCGACACG CGGGTCGACGTGAACAAGATAGAAGCCGCTCTACGCAGCGTCTTGGTGTAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
NA
Sequences:
>Translated_256_residues MGYKGPYQGPPRKRLFVALMGVTCLLVVGLIYLGWWIPTMGLTNIHPGLPRIVGMVFAVLSGMAVLGTLLLVLTTALGKD ILGTKFMRGVVIKFLLPLIEQIGSLCGISKDTIRQSFVAMNNSLVISQRLKVKPDRILILLPHCLQLSQCEIKVTGDITK CLRCGRCDIMGLAELAQKYQVEISVATGGTLARKVIIEKRPKLVLAVACERDLTSGIKDCYPLPVIGVLNDRPYGPCIDT RVDVNKIEAALRSVLV >Mature_255_residues GYKGPYQGPPRKRLFVALMGVTCLLVVGLIYLGWWIPTMGLTNIHPGLPRIVGMVFAVLSGMAVLGTLLLVLTTALGKDI LGTKFMRGVVIKFLLPLIEQIGSLCGISKDTIRQSFVAMNNSLVISQRLKVKPDRILILLPHCLQLSQCEIKVTGDITKC LRCGRCDIMGLAELAQKYQVEISVATGGTLARKVIIEKRPKLVLAVACERDLTSGIKDCYPLPVIGVLNDRPYGPCIDTR VDVNKIEAALRSVLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002829 - InterPro: IPR017446 [H]
Pfam domain/function: PF01976 DUF116 [H]
EC number: NA
Molecular weight: Translated: 27924; Mature: 27793
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYKGPYQGPPRKRLFVALMGVTCLLVVGLIYLGWWIPTMGLTNIHPGLPRIVGMVFAVL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH SGMAVLGTLLLVLTTALGKDILGTKFMRGVVIKFLLPLIEQIGSLCGISKDTIRQSFVAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH NNSLVISQRLKVKPDRILILLPHCLQLSQCEIKVTGDITKCLRCGRCDIMGLAELAQKYQ CCCEEEEHHHCCCCCEEEEECCHHCCCCCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHE VEISVATGGTLARKVIIEKRPKLVLAVACERDLTSGIKDCYPLPVIGVLNDRPYGPCIDT EEEEEECCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC RVDVNKIEAALRSVLV CCCHHHHHHHHHHHCC >Mature Secondary Structure GYKGPYQGPPRKRLFVALMGVTCLLVVGLIYLGWWIPTMGLTNIHPGLPRIVGMVFAVL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH SGMAVLGTLLLVLTTALGKDILGTKFMRGVVIKFLLPLIEQIGSLCGISKDTIRQSFVAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH NNSLVISQRLKVKPDRILILLPHCLQLSQCEIKVTGDITKCLRCGRCDIMGLAELAQKYQ CCCEEEEHHHCCCCCEEEEECCHHCCCCCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHE VEISVATGGTLARKVIIEKRPKLVLAVACERDLTSGIKDCYPLPVIGVLNDRPYGPCIDT EEEEEECCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC RVDVNKIEAALRSVLV CCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]