| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117034
Identifier: 197117034
GI number: 197117034
Start: 756680
End: 757705
Strand: Direct
Name: 197117034
Synonym: Gbem_0637
Alternate gene names: NA
Gene position: 756680-757705 (Clockwise)
Preceding gene: 308535179
Following gene: 197117035
Centisome position: 16.4
GC content: 64.81
Gene sequence:
>1026_bases ATGAGCAGATCCCCCCTGGCGAAAATCCCCGCCTTTTCTCTTTTTCTGGCGCTTTTTCTGTTTTTTTGCGCCGCACAGGC GCAGGCCGCGCAGATAACGGAATATCGCGTCATCCGGGAGCCGGTAAGCGACCGCTCCGGCAAACGGCTCCTCGCGGTCC GCAGTTTCAAATGCGACGGCGTGCCGCGCCTGCTCGCCGTCGACCCGGAAACGCTTGCGAGCTACGATCTCCCGGCCGAC TCGCCGAAAAGAAGCGGCGACGCCGGCGCTGACGCTTTCCGCGCCACCAGGCTCGCCCGCGCGCTCAATAAGTACAACTC CCCGCCATACCGGCTGCAAAACGGCGGGGCAGTCCACGCCGAGACGCAGGTTCAGGGGCTTTTCCTCACCGTCGACCTCT GCCCCTCCAAGCGCCCCTTCGAGCGGGAGCTCTTCGAGGCGACCGCAGCGCTAGGCCATGGCCGCGCCGTCCCGGTGGCC GTAATGATCTCCGGAGTGTGGCTGTCCACTCATCCGCAGGAACTCTCCTACCTGAAAGAGGCGATAGCCTCGGGGAAACT GGCCGTGACCTGGGTGAACCATTCGTACCACCACCATTACGACCCCAAGGTCCCCCTGGCGGAGAACTTCCTGCTCGCTC CGGGGACCGACCCGATGCAGGAGGTGCTTCAGGCAGAAGAGCTGCTGCTCTCCCAAGGGCTGGTCCCTTCCCCGTTTTTC CGCTTCCCGGGGCTTGTCTCCGACGGAGCCTGGATGCAGCGGCTCAAGGAACTCTCGCTGATCCCCATCGGGAGCGACGC CTGGCTTGCCAAGGGAGAGGCGCCGCGCCCGGGAAGCTTCATCCTGGTGCACGGCAACGGCAACGAGCCAAAAGGGGTGA AGCTGCTCTTGCCGATCTTGAAGGAAAAGGCGCCGCGCCTTTTGCCGCTTGCCGCCGCCTTCGGCGCCAAGGCGGAACCC ATCTCTCCCCCTCCCTTGACGGGAGGGGGCAGGGGGGTGGGTGAACTTGCCACGCAGCGCAAATAG
Upstream 100 bases:
>100_bases GGGGTCCTGAACGATCGCCCCTACGGCCCCTGCATCGACACGCGGGTCGACGTGAACAAGATAGAAGCCGCTCTACGCAG CGTCTTGGTGTAAAAATCCT
Downstream 100 bases:
>100_bases CACCTACCCCCACCCCCTAACCCCCTCCCGCTGGGGGAGGGGGGACTTGCTGGAGTCTTAGAGGATAAAGAGATGAAGAC GATGTTCCTCGCGCTCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSRSPLAKIPAFSLFLALFLFFCAAQAQAAQITEYRVIREPVSDRSGKRLLAVRSFKCDGVPRLLAVDPETLASYDLPAD SPKRSGDAGADAFRATRLARALNKYNSPPYRLQNGGAVHAETQVQGLFLTVDLCPSKRPFERELFEATAALGHGRAVPVA VMISGVWLSTHPQELSYLKEAIASGKLAVTWVNHSYHHHYDPKVPLAENFLLAPGTDPMQEVLQAEELLLSQGLVPSPFF RFPGLVSDGAWMQRLKELSLIPIGSDAWLAKGEAPRPGSFILVHGNGNEPKGVKLLLPILKEKAPRLLPLAAAFGAKAEP ISPPPLTGGGRGVGELATQRK
Sequences:
>Translated_341_residues MSRSPLAKIPAFSLFLALFLFFCAAQAQAAQITEYRVIREPVSDRSGKRLLAVRSFKCDGVPRLLAVDPETLASYDLPAD SPKRSGDAGADAFRATRLARALNKYNSPPYRLQNGGAVHAETQVQGLFLTVDLCPSKRPFERELFEATAALGHGRAVPVA VMISGVWLSTHPQELSYLKEAIASGKLAVTWVNHSYHHHYDPKVPLAENFLLAPGTDPMQEVLQAEELLLSQGLVPSPFF RFPGLVSDGAWMQRLKELSLIPIGSDAWLAKGEAPRPGSFILVHGNGNEPKGVKLLLPILKEKAPRLLPLAAAFGAKAEP ISPPPLTGGGRGVGELATQRK >Mature_340_residues SRSPLAKIPAFSLFLALFLFFCAAQAQAAQITEYRVIREPVSDRSGKRLLAVRSFKCDGVPRLLAVDPETLASYDLPADS PKRSGDAGADAFRATRLARALNKYNSPPYRLQNGGAVHAETQVQGLFLTVDLCPSKRPFERELFEATAALGHGRAVPVAV MISGVWLSTHPQELSYLKEAIASGKLAVTWVNHSYHHHYDPKVPLAENFLLAPGTDPMQEVLQAEELLLSQGLVPSPFFR FPGLVSDGAWMQRLKELSLIPIGSDAWLAKGEAPRPGSFILVHGNGNEPKGVKLLLPILKEKAPRLLPLAAAFGAKAEPI SPPPLTGGGRGVGELATQRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011330 - InterPro: IPR002509 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36891; Mature: 36760
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSPLAKIPAFSLFLALFLFFCAAQAQAAQITEYRVIREPVSDRSGKRLLAVRSFKCDG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC VPRLLAVDPETLASYDLPADSPKRSGDAGADAFRATRLARALNKYNSPPYRLQNGGAVHA CCEEEEECHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCEEEE ETQVQGLFLTVDLCPSKRPFERELFEATAALGHGRAVPVAVMISGVWLSTHPQELSYLKE EEEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECEEECCCHHHHHHHHH AIASGKLAVTWVNHSYHHHYDPKVPLAENFLLAPGTDPMQEVLQAEELLLSQGLVPSPFF HHHCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCHH RFPGLVSDGAWMQRLKELSLIPIGSDAWLAKGEAPRPGSFILVHGNGNEPKGVKLLLPIL HCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHH KEKAPRLLPLAAAFGAKAEPISPPPLTGGGRGVGELATQRK HHCCCCCEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure SRSPLAKIPAFSLFLALFLFFCAAQAQAAQITEYRVIREPVSDRSGKRLLAVRSFKCDG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC VPRLLAVDPETLASYDLPADSPKRSGDAGADAFRATRLARALNKYNSPPYRLQNGGAVHA CCEEEEECHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCEEEE ETQVQGLFLTVDLCPSKRPFERELFEATAALGHGRAVPVAVMISGVWLSTHPQELSYLKE EEEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECEEECCCHHHHHHHHH AIASGKLAVTWVNHSYHHHYDPKVPLAENFLLAPGTDPMQEVLQAEELLLSQGLVPSPFF HHHCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCHH RFPGLVSDGAWMQRLKELSLIPIGSDAWLAKGEAPRPGSFILVHGNGNEPKGVKLLLPIL HCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHH KEKAPRLLPLAAAFGAKAEPISPPPLTGGGRGVGELATQRK HHCCCCCEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]