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The map label for this gene is gspD [H]

Identifier: 308535177

GI number: 308535177

Start: 713793

End: 715715

Strand: Reverse

Name: gspD [H]

Synonym: NA

Alternate gene names: 308535177

Gene position: 715715-713793 (Counterclockwise)

Preceding gene: 197116993

Following gene: 197116991

Centisome position: 15.51

GC content: 61.67

Gene sequence:

>1923_bases
TTGAAAAGAAGATGTGCGCGCATCATAGCCATGCTCATGTTCCTGCTCGCCGCACCGCCCCTGGTGTTCGCCAAGGGTGT
AGTGCTGAACTTCACCGACGTGGATATCGCCACTATGGTGAAATTTGTCAGCGACCTGACCGGGAAGAACTTCATCATGG
ACGACAGGGTGAAGGGAAAGATCTCGGTGTTCTCCCCGGCGAAGCTCTCCAACGAGGAGGCGTACAACGTCTTCACCTCG
GTCCTGGAACTCAAGGGGTTCACCGTGGTACCGGCGGGAAAGGTGCTGAAGATAGTCCCCACGTCCAGCGCCAGGCAGTC
GGGGATGAGGATCCTCTCCGACGGTGAACGCTCCGTCGTGAACGACAGCTACCAAGCCAGGGTGATCCAGCTGGAGCACG
TCGCCCCACAGGACGCGGTGACCTTCCTGCAGCCGCTGGTCTCCAAGGACGGCCAGATCTCCGCCTTCGGCGCGGCGAAC
ATGATCCTCGTGGTCGACTCAGCATTCAACATCCAGAAGGTGCTGGGGATCCTCAAGCACATCGACACGGATCAGGTGCG
CGAGGGTGCCGAACTCGTTTTCCTCAAAAACGCGGCCGCCGAGAGCGTGGCGACGCTGGTCAAGGACTGGATGAGCGGCA
AGTCCTCCAAAGGGGGAGCCCCCGGCGCGGCTGCCACCAACACCGCATCCTCGACCGTAGTGCCCGACAACAGGCTGAAC
GCTCTGATCATCTTCGGCAGCGACAAGGACAAGACGGACGTGAAGAAGCTGATCGCGCTGGTCGACGTGGTCCCCCCCAC
CACCAGCAGCAAGGTCAACGTCTACTACCTGGAAAACGCCGAGGCCGCCGAGGTCGCCAAGGTGCTGGATGGCCTCCTCA
AAGGTACGGCGGCCACGCCGGCGCCCGCTGCGGGCGCTGCCGCGACGGCGCCGCAACAGGCCATCTTCGAGGGTGGGAAG
ATCACCATCACCCCCGACAAGTCGACCAACTCGCTGGTCATCATGGCCTCCCCCACCGACTACCAGAACCTCTTGCAGGT
GATCCAGAAGCTGGACCGCCGCAGCCGCCAGGTCTTCGTACAGGCGATGATCGCCGAGGTTTCCGCCAACAAGGCGAAGG
AACTCGGCCTGCAATGGGGGGTGGTCACCGGAGCTTCCAACGGCACGCTCTCTACCGTCGGAACCTTCGATCCCTTCGGT
GCCGTAGCCGGGTTGACCGGCACCCTGACCCTCGCCGGACAGCTGGGCATCACGCCACCGGACGCCGGCGTGGCCTTGTT
CCCCGCAACGCTCAAGGCGCTGCAGAGTAACGGCGCGCTGAACGTCCTGTCCACGCCCAACATCATGACCAGCGACAATA
AGGAAGCCGAGATCTTCGTGGGCGAGAACGTCCCCTTCCTCTCCGGCACCAACCTCACCTCCACCGGCCTCTCGCAGCAG
TCGATCGAGAGGAAAGACACCGGTATCATCCTGAAGATCAAGCCCCAGATCAGCGAGGGCGAGTACATAAAGCTCGACAT
CTACCAGGAAATCTCCGCGGTGAAGGATTTCGGCACCGCCACCAACCCCAACCTCGGAAGCACCAAGCGCTCGGCCAAGA
CCTCCGTGGTGGTGAAGAACACCGACACGGTCATCATCGGCGGACTGATTCAGGACACGGACCAGGTTACGGAAAGCAAG
ATCCCGCTTCTGGGCGACATCCCGCTCCTGGGATGGCTTTTCAAGACCAAGAAGACCACCCGGGACAAGACCAACCTGCT
GATCATGCTCACCCCGCGCATAATCAAGGACGCGCGCGACATGGCCGAGGTTTCCGTCAACCAGAGAAACGCCTTCAGCG
ACGCGGTGAAGACCAGCGAGCCGATCAACCTGGAGCAGGCCCTCAAGGAAAAGCCCAAGTCGGTGACCGAGGACAAGCCC
TAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: type II secretion system protein GspD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 640; Mature: 640

Protein sequence:
NA

Sequences:

>Translated_640_residues
MKRRCARIIAMLMFLLAAPPLVFAKGVVLNFTDVDIATMVKFVSDLTGKNFIMDDRVKGKISVFSPAKLSNEEAYNVFTS
VLELKGFTVVPAGKVLKIVPTSSARQSGMRILSDGERSVVNDSYQARVIQLEHVAPQDAVTFLQPLVSKDGQISAFGAAN
MILVVDSAFNIQKVLGILKHIDTDQVREGAELVFLKNAAAESVATLVKDWMSGKSSKGGAPGAAATNTASSTVVPDNRLN
ALIIFGSDKDKTDVKKLIALVDVVPPTTSSKVNVYYLENAEAAEVAKVLDGLLKGTAATPAPAAGAAATAPQQAIFEGGK
ITITPDKSTNSLVIMASPTDYQNLLQVIQKLDRRSRQVFVQAMIAEVSANKAKELGLQWGVVTGASNGTLSTVGTFDPFG
AVAGLTGTLTLAGQLGITPPDAGVALFPATLKALQSNGALNVLSTPNIMTSDNKEAEIFVGENVPFLSGTNLTSTGLSQQ
SIERKDTGIILKIKPQISEGEYIKLDIYQEISAVKDFGTATNPNLGSTKRSAKTSVVVKNTDTVIIGGLIQDTDQVTESK
IPLLGDIPLLGWLFKTKKTTRDKTNLLIMLTPRIIKDARDMAEVSVNQRNAFSDAVKTSEPINLEQALKEKPKSVTEDKP
>Mature_640_residues
MKRRCARIIAMLMFLLAAPPLVFAKGVVLNFTDVDIATMVKFVSDLTGKNFIMDDRVKGKISVFSPAKLSNEEAYNVFTS
VLELKGFTVVPAGKVLKIVPTSSARQSGMRILSDGERSVVNDSYQARVIQLEHVAPQDAVTFLQPLVSKDGQISAFGAAN
MILVVDSAFNIQKVLGILKHIDTDQVREGAELVFLKNAAAESVATLVKDWMSGKSSKGGAPGAAATNTASSTVVPDNRLN
ALIIFGSDKDKTDVKKLIALVDVVPPTTSSKVNVYYLENAEAAEVAKVLDGLLKGTAATPAPAAGAAATAPQQAIFEGGK
ITITPDKSTNSLVIMASPTDYQNLLQVIQKLDRRSRQVFVQAMIAEVSANKAKELGLQWGVVTGASNGTLSTVGTFDPFG
AVAGLTGTLTLAGQLGITPPDAGVALFPATLKALQSNGALNVLSTPNIMTSDNKEAEIFVGENVPFLSGTNLTSTGLSQQ
SIERKDTGIILKIKPQISEGEYIKLDIYQEISAVKDFGTATNPNLGSTKRSAKTSVVVKNTDTVIIGGLIQDTDQVTESK
IPLLGDIPLLGWLFKTKKTTRDKTNLLIMLTPRIIKDARDMAEVSVNQRNAFSDAVKTSEPINLEQALKEKPKSVTEDKP

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=603, Percent_Identity=32.8358208955224, Blast_Score=261, Evalue=8e-71,
Organism=Escherichia coli, GI1789793, Length=294, Percent_Identity=25.5102040816327, Blast_Score=92, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 68131; Mature: 68131

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRCARIIAMLMFLLAAPPLVFAKGVVLNFTDVDIATMVKFVSDLTGKNFIMDDRVKGK
CCHHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCCHHHHHHHHHHCCCCCEEECCCCCCE
ISVFSPAKLSNEEAYNVFTSVLELKGFTVVPAGKVLKIVPTSSARQSGMRILSDGERSVV
EEEECCCCCCCCHHHHHHHHHHHHCCCEEECCCCEEEEEECCCHHHCCCEEECCCCHHHH
NDSYQARVIQLEHVAPQDAVTFLQPLVSKDGQISAFGAANMILVVDSAFNIQKVLGILKH
CCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHH
IDTDQVREGAELVFLKNAAAESVATLVKDWMSGKSSKGGAPGAAATNTASSTVVPDNRLN
CCHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ALIIFGSDKDKTDVKKLIALVDVVPPTTSSKVNVYYLENAEAAEVAKVLDGLLKGTAATP
EEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCC
APAAGAAATAPQQAIFEGGKITITPDKSTNSLVIMASPTDYQNLLQVIQKLDRRSRQVFV
CCCCCCCCCCCHHHHHCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
QAMIAEVSANKAKELGLQWGVVTGASNGTLSTVGTFDPFGAVAGLTGTLTLAGQLGITPP
HHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCHHHHHCCCEEEEEECCCCCCCC
DAGVALFPATLKALQSNGALNVLSTPNIMTSDNKEAEIFVGENVPFLSGTNLTSTGLSQQ
CCCEEEHHHHHHHHHCCCCEEEEECCCEEECCCCCEEEEECCCCCEECCCCCCCCCCCHH
SIERKDTGIILKIKPQISEGEYIKLDIYQEISAVKDFGTATNPNLGSTKRSAKTSVVVKN
HHHHCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEC
TDTVIIGGLIQDTDQVTESKIPLLGDIPLLGWLFKTKKTTRDKTNLLIMLTPRIIKDARD
CCEEEEECCHHCHHHHHHCCCCCEECCHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHH
MAEVSVNQRNAFSDAVKTSEPINLEQALKEKPKSVTEDKP
HHHHCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKRRCARIIAMLMFLLAAPPLVFAKGVVLNFTDVDIATMVKFVSDLTGKNFIMDDRVKGK
CCHHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCCHHHHHHHHHHCCCCCEEECCCCCCE
ISVFSPAKLSNEEAYNVFTSVLELKGFTVVPAGKVLKIVPTSSARQSGMRILSDGERSVV
EEEECCCCCCCCHHHHHHHHHHHHCCCEEECCCCEEEEEECCCHHHCCCEEECCCCHHHH
NDSYQARVIQLEHVAPQDAVTFLQPLVSKDGQISAFGAANMILVVDSAFNIQKVLGILKH
CCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHH
IDTDQVREGAELVFLKNAAAESVATLVKDWMSGKSSKGGAPGAAATNTASSTVVPDNRLN
CCHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ALIIFGSDKDKTDVKKLIALVDVVPPTTSSKVNVYYLENAEAAEVAKVLDGLLKGTAATP
EEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCC
APAAGAAATAPQQAIFEGGKITITPDKSTNSLVIMASPTDYQNLLQVIQKLDRRSRQVFV
CCCCCCCCCCCHHHHHCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
QAMIAEVSANKAKELGLQWGVVTGASNGTLSTVGTFDPFGAVAGLTGTLTLAGQLGITPP
HHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCHHHHHCCCEEEEEECCCCCCCC
DAGVALFPATLKALQSNGALNVLSTPNIMTSDNKEAEIFVGENVPFLSGTNLTSTGLSQQ
CCCEEEHHHHHHHHHCCCCEEEEECCCEEECCCCCEEEEECCCCCEECCCCCCCCCCCHH
SIERKDTGIILKIKPQISEGEYIKLDIYQEISAVKDFGTATNPNLGSTKRSAKTSVVVKN
HHHHCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEC
TDTVIIGGLIQDTDQVTESKIPLLGDIPLLGWLFKTKKTTRDKTNLLIMLTPRIIKDARD
CCEEEEECCHHCHHHHHHCCCCCEECCHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHH
MAEVSVNQRNAFSDAVKTSEPINLEQALKEKPKSVTEDKP
HHHHCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934833; 10984043 [H]