Click here to switch to the map view.

The map label for this gene is 197116993

Identifier: 197116993

GI number: 197116993

Start: 715767

End: 716135

Strand: Reverse

Name: 197116993

Synonym: Gbem_0596

Alternate gene names: NA

Gene position: 716135-715767 (Counterclockwise)

Preceding gene: 197116994

Following gene: 308535177

Centisome position: 15.52

GC content: 47.15

Gene sequence:

>369_bases
ATGTACCGTAGCTTCAAGGATATGCCGGTTTGGCAACACGCGATGGCGGTGGCCGAGCAGGTTTACTCTGCCACGGAACA
CCTTCCTAAGAAAGAAGATTACGGACTGACTTCCCAGATTAGACGGTCGGCCTTGAGCATATCAGCCAACATAGCCGAAG
CTTATGGTAGAAAGCATCTCCTTGACAAGGTCAACTTTTATTATCATGCACGTGGCTCTTTAACCGAAACACAAAGCCAC
CTCGAATATTCCAAAAGGGTCGGTTACCTTAAAAGCGAAGAAGCGGATTCACTCGATGACCGCCTTTCTCAGCTGTACCA
GGAAATCAACAAGATTGTATTGGCACTGAAGGAAATGCATTCCGATTAG

Upstream 100 bases:

>100_bases
GGCAGAGGTGAAACAGATAAAGATAAAGATAAAGATTGAGGAAAGGCAAGGCAAGACAGGGAGGAAGAGGTAAGCCAAGA
ATATCAGCGCCGAGGATGCC

Downstream 100 bases:

>100_bases
TCTTTATCTCTATCTTTATCTGCCTTTATCTGCCTTTGTGGGGGGTTTTTCTTGAAAAGAAGATGTGCGCGCATCATAGC
CATGCTCATGTTCCTGCTCG

Product: 30S ribosomal protein S23

Products: NA

Alternate protein names: S23 Ribosomal; 23S Ribosomal Protein; 30S Ribosomal Protein S; Intervening Sequence

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MYRSFKDMPVWQHAMAVAEQVYSATEHLPKKEDYGLTSQIRRSALSISANIAEAYGRKHLLDKVNFYYHARGSLTETQSH
LEYSKRVGYLKSEEADSLDDRLSQLYQEINKIVLALKEMHSD

Sequences:

>Translated_122_residues
MYRSFKDMPVWQHAMAVAEQVYSATEHLPKKEDYGLTSQIRRSALSISANIAEAYGRKHLLDKVNFYYHARGSLTETQSH
LEYSKRVGYLKSEEADSLDDRLSQLYQEINKIVLALKEMHSD
>Mature_122_residues
MYRSFKDMPVWQHAMAVAEQVYSATEHLPKKEDYGLTSQIRRSALSISANIAEAYGRKHLLDKVNFYYHARGSLTETQSH
LEYSKRVGYLKSEEADSLDDRLSQLYQEINKIVLALKEMHSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14142; Mature: 14142

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRSFKDMPVWQHAMAVAEQVYSATEHLPKKEDYGLTSQIRRSALSISANIAEAYGRKHL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LDKVNFYYHARGSLTETQSHLEYSKRVGYLKSEEADSLDDRLSQLYQEINKIVLALKEMH
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SD
CC
>Mature Secondary Structure
MYRSFKDMPVWQHAMAVAEQVYSATEHLPKKEDYGLTSQIRRSALSISANIAEAYGRKHL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LDKVNFYYHARGSLTETQSHLEYSKRVGYLKSEEADSLDDRLSQLYQEINKIVLALKEMH
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA