| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is gluP [H]
Identifier: 308535165
GI number: 308535165
Start: 556190
End: 557014
Strand: Direct
Name: gluP [H]
Synonym: NA
Alternate gene names: 308535165
Gene position: 556190-557014 (Clockwise)
Preceding gene: 197116859
Following gene: 197116861
Centisome position: 12.05
GC content: 64.12
Gene sequence:
>825_bases ATGAGTTCCACAAAGTGTTCCAGATGCGGAAGACAGATAGATGCCAGGGAGCCTCAGTGCATCTGGTGCGGTGCGCCGCG TCCAAGCTTCGGCGCCAGGTTCAGAGAGATGCTGCGCGGAGGGCTCGATGCAGGCTTTGTGGTGCAGGCGATCATCGCTG CCAATGCGCTCTTCTACCTACTCTCGCTGCTGGTGAGCGGCAGGCGCGGGTTCGACATGAACCCCCTGAGCTTCCTGTCG CCGGACCAGAACAGCTTGCTGCTGCTGGGCGCCACGGGCACGATACCGGTGCTGGAGCTTGGGCGCGTCTGGAGCCTCAT CTCCGCCAACTACCTGCACGGGGGGCTGCTGCACATCCTTTTCAACATGATGGCGCTGCGCCAGATCGGCCCTTGGGTCA GTGCGGAGTTCGGCGCGAGCCGCATGTTCGTCATCTATACCTTGAGCGGCGTTGCCGGCTACGTCGCCTCCTTCTTTGCC GGGATCCCCTTCACCATCGGCGCTTCCGCCTCCGTCTGCGGCCTGATCGGCGCCCTTTTCTATTTCGGCAAGAGCCGCGG CGGCAATTACGGCGCGGCCGTCTCCCGCGAGGTGAGCGGCTGGCTGATCAGCCTGGTCCTCTTCGGCCTGATCATGCCCG GCATCAACAACTGGGGGCATGGCGGCGGCGTAGTGGGGGGGATCGTGCTGGCGAAACTCCTGGGGTACCAGGAGCGGAGC CACGAGAACAGCGCGCACCGCCTGCTGGCGCTGATCTGCGTCGTCGCCACCGTGGCCGTCCTTTGCTATGCCGCCTATTT TTCCCTCGCCTACCGGTTCAGCTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: rhomboid-like membrane protein
Products: NA
Alternate protein names: Intramembrane serine protease [H]
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
NA
Sequences:
>Translated_274_residues MSSTKCSRCGRQIDAREPQCIWCGAPRPSFGARFREMLRGGLDAGFVVQAIIAANALFYLLSLLVSGRRGFDMNPLSFLS PDQNSLLLLGATGTIPVLELGRVWSLISANYLHGGLLHILFNMMALRQIGPWVSAEFGASRMFVIYTLSGVAGYVASFFA GIPFTIGASASVCGLIGALFYFGKSRGGNYGAAVSREVSGWLISLVLFGLIMPGINNWGHGGGVVGGIVLAKLLGYQERS HENSAHRLLALICVVATVAVLCYAAYFSLAYRFS >Mature_273_residues SSTKCSRCGRQIDAREPQCIWCGAPRPSFGARFREMLRGGLDAGFVVQAIIAANALFYLLSLLVSGRRGFDMNPLSFLSP DQNSLLLLGATGTIPVLELGRVWSLISANYLHGGLLHILFNMMALRQIGPWVSAEFGASRMFVIYTLSGVAGYVASFFAG IPFTIGASASVCGLIGALFYFGKSRGGNYGAAVSREVSGWLISLVLFGLIMPGINNWGHGGGVVGGIVLAKLLGYQERSH ENSAHRLLALICVVATVAVLCYAAYFSLAYRFS
Specific function: Rhomboid-type serine protease that catalyzes intramembrane proteolysis. Important for normal cell division and sporulation. May act as a glucose exporter [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002610 - InterPro: IPR022764 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF01694 Rhomboid; PF00515 TPR_1 [H]
EC number: =3.4.21.105 [H]
Molecular weight: Translated: 29305; Mature: 29173
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTKCSRCGRQIDAREPQCIWCGAPRPSFGARFREMLRGGLDAGFVVQAIIAANALFYL CCCCCHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LSLLVSGRRGFDMNPLSFLSPDQNSLLLLGATGTIPVLELGRVWSLISANYLHGGLLHIL HHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FNMMALRQIGPWVSAEFGASRMFVIYTLSGVAGYVASFFAGIPFTIGASASVCGLIGALF HHHHHHHHHCCCHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHH YFGKSRGGNYGAAVSREVSGWLISLVLFGLIMPGINNWGHGGGVVGGIVLAKLLGYQERS HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHC HENSAHRLLALICVVATVAVLCYAAYFSLAYRFS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSTKCSRCGRQIDAREPQCIWCGAPRPSFGARFREMLRGGLDAGFVVQAIIAANALFYL CCCCHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LSLLVSGRRGFDMNPLSFLSPDQNSLLLLGATGTIPVLELGRVWSLISANYLHGGLLHIL HHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FNMMALRQIGPWVSAEFGASRMFVIYTLSGVAGYVASFFAGIPFTIGASASVCGLIGALF HHHHHHHHHCCCHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHH YFGKSRGGNYGAAVSREVSGWLISLVLFGLIMPGINNWGHGGGVVGGIVLAKLLGYQERS HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHC HENSAHRLLALICVVATVAVLCYAAYFSLAYRFS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]