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The map label for this gene is shiC

Identifier: 30065062

GI number: 30065062

Start: 3962995

End: 3963513

Strand: Reverse

Name: shiC

Synonym: S4831

Alternate gene names: NA

Gene position: 3963513-3962995 (Counterclockwise)

Preceding gene: 30065065

Following gene: 30065057

Centisome position: 86.18

GC content: 33.91

Gene sequence:

>519_bases
ATGATGCTGTTCAGTATTATAATAATGTTATTATCACCAAAGATAACTCATGCAAATGAGAAAGTAATATGTCAAAACAG
TGCATCCTTTGTGACCAAAGAGTTTATCTGCGGCACTATACTTGTCTCATTAATACTCAGTTCTCTATTTTGCTACATAT
CAATATCACCATCAATTTTCATGCATACTTATGGCCTGAGTACTTTTAGTTACTCAATTATTTTCTCCTTCTCAGTTTTA
TTTTTCATAATCGGAAATCAATTATCAAAGATTGAAAAATTATCCAACCTATGGTTTTTATTACCCAATAGCCAATTTTA
TCGCATTACAAATAAATGGTTCAAAAACAGGATTTGCCGCATCTATTACAGGTTTTACTCAAACAATAAGCGCTGGTACA
ATCAGTTTCCTGTCAGTAACCGTAAGCGACAACGGTGTTGGTCCCGGAACTACTTTAGGTCTTGGTTCACTAATAACTTC
ATTACTGTCAATAGCCGTAATCGCCATTGCAGGAAATAA

Upstream 100 bases:

>100_bases
GGCGCTTTCTGATATATCATCTGTAAGCGCAGTAATACCATTAGTAGCACCTCGCGCATTGATTATTGAATATTATAACT
GGAATGTTATATTTCTTGTT

Downstream 100 bases:

>100_bases
TAAAAAGTAAGTGTACTCTGACTGCGTATGTATCTACTTGAACCGCCCCGGTTTTCCTGGAGAGTGTTTTATCTGTGAAC
TCAGGCTGCCAGATCATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MMLFSIIIMLLSPKITHANEKVICQNSASFVTKEFICGTILVSLILSSLFCYISISPSIFMHTYGLSTFSYSIIFSFSVL
FFIIGNQLSKIEKLSNLWFLLPNSQFYRITNKWFKNRICRIYYRFYSNNKRWYNQFPVSNRKRQRCWSRNYFRSWFTNNF
ITVNSRNRHCRK

Sequences:

>Translated_172_residues
MMLFSIIIMLLSPKITHANEKVICQNSASFVTKEFICGTILVSLILSSLFCYISISPSIFMHTYGLSTFSYSIIFSFSVL
FFIIGNQLSKIEKLSNLWFLLPNSQFYRITNKWFKNRICRIYYRFYSNNKRWYNQFPVSNRKRQRCWSRNYFRSWFTNNF
ITVNSRNRHCRK
>Mature_172_residues
MMLFSIIIMLLSPKITHANEKVICQNSASFVTKEFICGTILVSLILSSLFCYISISPSIFMHTYGLSTFSYSIIFSFSVL
FFIIGNQLSKIEKLSNLWFLLPNSQFYRITNKWFKNRICRIYYRFYSNNKRWYNQFPVSNRKRQRCWSRNYFRSWFTNNF
ITVNSRNRHCRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20744; Mature: 20744

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLFSIIIMLLSPKITHANEKVICQNSASFVTKEFICGTILVSLILSSLFCYISISPSIF
CHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHE
MHTYGLSTFSYSIIFSFSVLFFIIGNQLSKIEKLSNLWFLLPNSQFYRITNKWFKNRICR
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEHHHHHHHHHHHHH
IYYRFYSNNKRWYNQFPVSNRKRQRCWSRNYFRSWFTNNFITVNSRNRHCRK
HHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC
>Mature Secondary Structure
MMLFSIIIMLLSPKITHANEKVICQNSASFVTKEFICGTILVSLILSSLFCYISISPSIF
CHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHE
MHTYGLSTFSYSIIFSFSVLFFIIGNQLSKIEKLSNLWFLLPNSQFYRITNKWFKNRICR
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEHHHHHHHHHHHHH
IYYRFYSNNKRWYNQFPVSNRKRQRCWSRNYFRSWFTNNFITVNSRNRHCRK
HHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA