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The map label for this gene is shiB

Identifier: 30065065

GI number: 30065065

Start: 3964845

End: 3965306

Strand: Reverse

Name: shiB

Synonym: S4833

Alternate gene names: NA

Gene position: 3965306-3964845 (Counterclockwise)

Preceding gene: 30065066

Following gene: 30065062

Centisome position: 86.21

GC content: 47.84

Gene sequence:

>462_bases
ATGGATGAAAATGCTTTAAGGTTTGCCTCATACTGGCGCAACTCGCTTGCAGATGCTGAGTCAGGAAAGGGCTGTTTTGA
ACGGAAAGACGCCCAAAATTTCACTCACTGGCATGGGATAGCGGCGGGACGTCTTGACGAAGCGATTGTCAATAAATTTT
TTAAGGGAGAAAAAGACGATGTCGAAACTGTCAATGTCATCTTACGCCCAAAAGTTTATTTCCGGTTACTGCAGCATGGT
AAGGACCGTTCCGCAGGCACGCCTGATATTGTTACACCGATAGTGACGCCAGCCTTGCTAAGCCGTGAGGGTTTTTTATA
TCCGACGCCAGCGACCTCCATTCCCAGAGACCTGCTTGAACCTTTGCCAAAAGGAGCATTTTCGATTGGTGAGATTGGGC
AGTATGACAAATACAAGACGACCCATACTGATCCTACCCACGTAATGTGGACACGGCCCTAA

Upstream 100 bases:

>100_bases
AAAACATTGCATCCAACTTTTTTAATATGGACAATAGTTGTCCATACGGTGGTTTTATATTCGATAAATCAATGGATTTC
ATTGAGTCACAGGACTGGTA

Downstream 100 bases:

>100_bases
GCGAGATTATGGTTTTCAAATTGTTCCGGGCTGAGACCGCCACAGGCACTGTGACGACGCCAGCGATTGTAATCACACTC
GATATAATTAAACACCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Superfamily I DNA Helicase; I DNA Helicase; Phospholipase D Active Site Motif

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MDENALRFASYWRNSLADAESGKGCFERKDAQNFTHWHGIAAGRLDEAIVNKFFKGEKDDVETVNVILRPKVYFRLLQHG
KDRSAGTPDIVTPIVTPALLSREGFLYPTPATSIPRDLLEPLPKGAFSIGEIGQYDKYKTTHTDPTHVMWTRP

Sequences:

>Translated_153_residues
MDENALRFASYWRNSLADAESGKGCFERKDAQNFTHWHGIAAGRLDEAIVNKFFKGEKDDVETVNVILRPKVYFRLLQHG
KDRSAGTPDIVTPIVTPALLSREGFLYPTPATSIPRDLLEPLPKGAFSIGEIGQYDKYKTTHTDPTHVMWTRP
>Mature_153_residues
MDENALRFASYWRNSLADAESGKGCFERKDAQNFTHWHGIAAGRLDEAIVNKFFKGEKDDVETVNVILRPKVYFRLLQHG
KDRSAGTPDIVTPIVTPALLSREGFLYPTPATSIPRDLLEPLPKGAFSIGEIGQYDKYKTTHTDPTHVMWTRP

Specific function: Unknown

COG id: COG1112

COG function: function code L; Superfamily I DNA and RNA helicases and helicase subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17276; Mature: 17276

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDENALRFASYWRNSLADAESGKGCFERKDAQNFTHWHGIAAGRLDEAIVNKFFKGEKDD
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCC
VETVNVILRPKVYFRLLQHGKDRSAGTPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
HHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
PLPKGAFSIGEIGQYDKYKTTHTDPTHVMWTRP
HCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MDENALRFASYWRNSLADAESGKGCFERKDAQNFTHWHGIAAGRLDEAIVNKFFKGEKDD
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCC
VETVNVILRPKVYFRLLQHGKDRSAGTPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
HHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
PLPKGAFSIGEIGQYDKYKTTHTDPTHVMWTRP
HCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA