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The map label for this gene is shiD

Identifier: 30065057

GI number: 30065057

Start: 3957757

End: 3958155

Strand: Reverse

Name: shiD

Synonym: S4830

Alternate gene names: NA

Gene position: 3958155-3957757 (Counterclockwise)

Preceding gene: 30065062

Following gene: 30065054

Centisome position: 86.06

GC content: 40.35

Gene sequence:

>399_bases
ATGAAAAGATGGTTTAAATACCCCGTTACTTTTGACTTACACTATACGGTATCGCATCGTTTAATATTCGCACCGGCCAG
ATTTTTATTTCTATTAGTTGTCACAATACTGAATGCGTACGACCACAGTATTCTGGCTCCTGTGTGGTTATGCTTTAATT
CTGCGTTCCGGGCAGATAAGCAGTTGCTTGCAGGAATCCTTCTTGTGTTAATGTCAGTTCCCCTTTTTACCAGTGCTGAT
TTCCACATTCCGTCCAACAGAGCTTATAGCCTTTCCCTGGATTATAGCATTGTCCGGCTGAAGTTCTTTTTGAATAATAA
TAGAAGCACTGCTGGCAGATCCAGTCCGTTTTTCATAACCCACTGTACTGATAACCATAATCTAATCAGTAGAAATTGA

Upstream 100 bases:

>100_bases
AGAACTTCTTCAGCACACTGCTAAAACGCATAGTGATCGAGCGCTGATTCTGGCGAACAACTGAACTAATACATCAGAAT
CTGCATTATGTTAAATAAAT

Downstream 100 bases:

>100_bases
GTCGAAAATAAGCACTACTCTATACAGGATAATTAGAGGTCAGTTTGATTATTCACAATTCATCATCAGCATTTTCTATT
TCTGACGAAATCAACATGAA

Product: colV-immunity protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MKRWFKYPVTFDLHYTVSHRLIFAPARFLFLLVVTILNAYDHSILAPVWLCFNSAFRADKQLLAGILLVLMSVPLFTSAD
FHIPSNRAYSLSLDYSIVRLKFFLNNNRSTAGRSSPFFITHCTDNHNLISRN

Sequences:

>Translated_132_residues
MKRWFKYPVTFDLHYTVSHRLIFAPARFLFLLVVTILNAYDHSILAPVWLCFNSAFRADKQLLAGILLVLMSVPLFTSAD
FHIPSNRAYSLSLDYSIVRLKFFLNNNRSTAGRSSPFFITHCTDNHNLISRN
>Mature_132_residues
MKRWFKYPVTFDLHYTVSHRLIFAPARFLFLLVVTILNAYDHSILAPVWLCFNSAFRADKQLLAGILLVLMSVPLFTSAD
FHIPSNRAYSLSLDYSIVRLKFFLNNNRSTAGRSSPFFITHCTDNHNLISRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15271; Mature: 15271

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRWFKYPVTFDLHYTVSHRLIFAPARFLFLLVVTILNAYDHSILAPVWLCFNSAFRADK
CCCEECCCEEEEEEEEECCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
QLLAGILLVLMSVPLFTSADFHIPSNRAYSLSLDYSIVRLKFFLNNNRSTAGRSSPFFIT
HHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCEEEE
HCTDNHNLISRN
EECCCCCEECCC
>Mature Secondary Structure
MKRWFKYPVTFDLHYTVSHRLIFAPARFLFLLVVTILNAYDHSILAPVWLCFNSAFRADK
CCCEECCCEEEEEEEEECCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
QLLAGILLVLMSVPLFTSADFHIPSNRAYSLSLDYSIVRLKFFLNNNRSTAGRSSPFFIT
HHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCEEEE
HCTDNHNLISRN
EECCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA