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The map label for this gene is yidK

Identifier: 30064991

GI number: 30064991

Start: 3880216

End: 3881931

Strand: Reverse

Name: yidK

Synonym: S3986

Alternate gene names: 30064991

Gene position: 3881931-3880216 (Counterclockwise)

Preceding gene: 30064993

Following gene: 30064989

Centisome position: 84.4

GC content: 52.91

Gene sequence:

>1716_bases
ATGAATTCGTTACAAATCTTGAGTTTTGTCGGTTTTACGCTGCTGGTGGCGGTGATCACCTGGTGGAAGGTTCGCAAAAC
AGATACCGGATCGCAACAAGGCTATTTTCTTGCCGGACGTTCACTAAAAGCGCCGGTTATTGCCGCTTCGTTAATGTTAA
CCAACCTTTCCACGGAACAACTGGTTGGTCTTTCCGGGCAGGCCTACAAAAGCGGCATGTCGGTGATGGGCTGGGAAGTG
ACTTCAGCGGTGACGCTGATCTTCCTCGCGCTAATCTTTTTACCGCGCTATCTGAAGCGCGGCATTGCCACCATCCCCGA
TTTTCTGGAGGAACGTTATGATAAAACGACGCGTATTATCATCGACTTCTGCTTCCTCATTGCCACCGGCGTCTGCTTTC
TGCCGATTGTTCTCTACTCCGGCGCGTTGGCGCTCAACAGCCTGTTTCACGTCGGGGAATCGCTACAGATTTCTCACGGT
GCGGCTATCTGGCTACTGGTAATTTTGCTTGGTCTGGCGGGAATTTTGTATGCGGTGATCGGCGGACTGCGCGCAATGGC
AGTGGCGGACTCCATCAACGGTATTGGGCTGGTTATCGGCGGGTTGATGGTGCCGGTATTTGGCCTGATCGCGATAGGCA
AGGGCAGCTTTATGCAGGGCATTGAGCAAATTACCACCGTTCACGCCGAGAAATTAAACTCAGTCGGTGGCCCGACCGAT
CCCTTGCCGATTGGCGCGGCATTTACCGGTTTAATTCTGGTGAACACCTTTTACTGGTGTACAAATCAGGGCATCGTGCA
ACGCACGCTGGCGTCAAAAAGCCTGGCGGAAGGGCAAAAGGGGGCGCTGTTAACGGCGGTGCTGAAAATGCTCGACCCGC
TGGTACTGGTGCTGCCAGGGTTGATTGCGTTTCATCTGTATCAGGATCTACCGAAAGCCGACATGGCCTACCCGACGCTG
GTCAATAACGTTCTGCCAGTGCCACTGGAGGGTTTCTTCGGCGCGGTGTTATTTGGTGCGGTGATCAGTACCTTCAACGG
CTTTCTGAATAGCGCCAGTACATTATTCAGTATGGGTATTTACCGTCGCATCATTAACCAGAATGCCGAGCCGCAGCAGC
TGGTCACCGTCGGGCGCAAATTTGGTTTCTTTATCGCTATCGTTTCGGTTTTGGTAGCGCCGTGGATCGCGAACGCGCCG
CAGGGGCTGTATAGCTGGATGAAACAGCTCAACGGCATTTACAACGTGCCGCTGGTTACCATCATCATTATGGGCTTTTT
CTTTCCGCGCATCCCGGCGCTGGCGGCAAAAGTGGCGATGGGGATTGGCATAATCAGCTACATCACCATCAACTATCTGG
TGAAGTTCGACTTCCATTTCCTCTATGTGCTGGCCTGTACGTTCTGCATCAACGTGGTCGTGATGCTGGTGATCGGTTTT
ATCAAACCGCGCGCCACGCCGTTCACCTTCAAAGATGCGTTTGCGGTGGACATGAAACCGTGGAAAAACGTCAAGATCGC
GTCAATTGGTATCCTGTTCGCGATGATTGGCGTCTATGTCGGGCTGGCTGAATTCGGCGGCTACGGTACGCGCTGGTTAG
CGATGATCAGTTATTTCATCGCTGCCGTAGTGATTGTCTACCTGATTTTTGACAGCTGGTGGCATCGTCACGACCCAGCC
GTAACCTTTACTCCCGACGCGAAGGATAGCCTATGA

Upstream 100 bases:

>100_bases
ACGACGTTTGTATTTTAAGAATCTGACTGCCTGACCCGACGCATTTTACCTCTCCCTATATTCATGCGTCCGGGACATAA
ACATAAATAAGGGCTATGAG

Downstream 100 bases:

>100_bases
AACGCCCCAATTGACCGATACCCAGGCCACCAATATGGTCGGTTGCTATAGCGGTAAACCGCTGAATACGCAAAATATTG
ATAGTCTGGCGGCGGAAGGT

Product: putative symporter YidK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 571; Mature: 571

Protein sequence:

>571_residues
MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEV
TSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHG
AAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAIGKGSFMQGIEQITTVHAEKLNSVGGPTD
PLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTL
VNNVLPVPLEGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLVAPWIANAP
QGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGF
IKPRATPFTFKDAFAVDMKPWKNVKIASIGILFAMIGVYVGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWWHRHDPA
VTFTPDAKDSL

Sequences:

>Translated_571_residues
MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEV
TSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHG
AAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAIGKGSFMQGIEQITTVHAEKLNSVGGPTD
PLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTL
VNNVLPVPLEGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLVAPWIANAP
QGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGF
IKPRATPFTFKDAFAVDMKPWKNVKIASIGILFAMIGVYVGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWWHRHDPA
VTFTPDAKDSL
>Mature_571_residues
MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEV
TSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHG
AAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAIGKGSFMQGIEQITTVHAEKLNSVGGPTD
PLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTL
VNNVLPVPLEGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLVAPWIANAP
QGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGF
IKPRATPFTFKDAFAVDMKPWKNVKIASIGILFAMIGVYVGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWWHRHDPA
VTFTPDAKDSL

Specific function: Unknown

COG id: COG4146

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI110835708, Length=461, Percent_Identity=29.0672451193059, Blast_Score=184, Evalue=3e-46,
Organism=Homo sapiens, GI17941285, Length=456, Percent_Identity=29.6052631578947, Blast_Score=175, Evalue=1e-43,
Organism=Homo sapiens, GI14140236, Length=489, Percent_Identity=26.3803680981595, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI4507031, Length=468, Percent_Identity=27.3504273504274, Blast_Score=171, Evalue=3e-42,
Organism=Homo sapiens, GI4507033, Length=472, Percent_Identity=29.6610169491525, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI206597483, Length=505, Percent_Identity=27.5247524752475, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI109659836, Length=454, Percent_Identity=29.7356828193833, Blast_Score=157, Evalue=4e-38,
Organism=Homo sapiens, GI206597487, Length=530, Percent_Identity=26.9811320754717, Blast_Score=152, Evalue=9e-37,
Organism=Homo sapiens, GI109659839, Length=470, Percent_Identity=28.5106382978723, Blast_Score=151, Evalue=2e-36,
Organism=Homo sapiens, GI256985183, Length=435, Percent_Identity=25.2873563218391, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI157671931, Length=451, Percent_Identity=22.8381374722838, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI4507035, Length=440, Percent_Identity=22.7272727272727, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI167466278, Length=337, Percent_Identity=25.5192878338279, Blast_Score=76, Evalue=1e-13,
Organism=Escherichia coli, GI1790113, Length=571, Percent_Identity=98.5989492119089, Blast_Score=1130, Evalue=0.0,
Organism=Escherichia coli, GI87082237, Length=472, Percent_Identity=23.0932203389831, Blast_Score=70, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115533094, Length=433, Percent_Identity=20.554272517321, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI221459584, Length=335, Percent_Identity=28.955223880597, Blast_Score=83, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24645928, Length=520, Percent_Identity=23.8461538461538, Blast_Score=82, Evalue=8e-16,
Organism=Drosophila melanogaster, GI19920916, Length=359, Percent_Identity=23.6768802228412, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI161076631, Length=356, Percent_Identity=23.876404494382, Blast_Score=77, Evalue=5e-14,
Organism=Drosophila melanogaster, GI28573698, Length=342, Percent_Identity=24.8538011695906, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221459586, Length=417, Percent_Identity=23.7410071942446, Blast_Score=73, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24651739, Length=439, Percent_Identity=21.1845102505695, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221459588, Length=413, Percent_Identity=22.7602905569007, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24641117, Length=299, Percent_Identity=22.742474916388, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 62138; Mature: 62138

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCCCEEECCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]