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The map label for this gene is yidH

Identifier: 30064989

GI number: 30064989

Start: 3877823

End: 3878170

Strand: Reverse

Name: yidH

Synonym: S3983

Alternate gene names: 30064989

Gene position: 3878170-3877823 (Counterclockwise)

Preceding gene: 30064991

Following gene: 30064988

Centisome position: 84.32

GC content: 52.01

Gene sequence:

>348_bases
ATGAAAATTTCCCGCCTTGGAGAAGCGCCCGATTACCGCTTCTCGCTGGCTAATGAGCGTACTTTTCTGGCGTGGATCCG
TACCGCACTAGGATTTCTGGCGGCGGGGGTTGGGCTTGATCAACTTGCGCCAGATTTCGCCACGCCCGTCATTCGTGAAC
TGCTGGCGTTGTTGTTGTGTCTGTTTTCCGGCGGGTTAGCAATGTATGGCTACCTGCGCTGGTTACGCAATGAAAAAGCG
ATGCGTCTGAAAGAGGACCTGCCCTACACCAACAGCTTATTAATCATCAGCTTAATATTGATGGTTGTGGCGGTGATCGT
TATGGGACTGGTGTTGTATGCCGGATAG

Upstream 100 bases:

>100_bases
CTTGTAGCGGATGGCAAAAGCATATCAGGAAACGGGCGGACGAAATTCTTAAAAAAAACCGCTAAAGATAGAGCGTTAGT
GAAATTGCAAAGGAGCAACA

Downstream 100 bases:

>100_bases
CCGTAAAGCCAGACGCATTGCCGACCCAGGGCTGCAGCCGGAGCGCACATCACTGGCGTGGTTTCGTACCATGCTGGGCT
ACGGCGCGTTGATGGCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MKISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAPDFATPVIRELLALLLCLFSGGLAMYGYLRWLRNEKA
MRLKEDLPYTNSLLIISLILMVVAVIVMGLVLYAG

Sequences:

>Translated_115_residues
MKISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAPDFATPVIRELLALLLCLFSGGLAMYGYLRWLRNEKA
MRLKEDLPYTNSLLIISLILMVVAVIVMGLVLYAG
>Mature_115_residues
MKISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAPDFATPVIRELLALLLCLFSGGLAMYGYLRWLRNEKA
MRLKEDLPYTNSLLIISLILMVVAVIVMGLVLYAG

Specific function: Unknown

COG id: COG2149

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2272

Homologues:

Organism=Escherichia coli, GI1790110, Length=115, Percent_Identity=100, Blast_Score=227, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIDH_ECO57 (P0ADM2)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   A98206
- PIR:   C86052
- RefSeq:   NP_290315.1
- RefSeq:   NP_312644.1
- ProteinModelPortal:   P0ADM2
- EnsemblBacteria:   EBESCT00000024093
- EnsemblBacteria:   EBESCT00000056260
- GeneID:   915417
- GeneID:   960785
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z5171
- KEGG:   ecs:ECs4617
- GeneTree:   EBGT00050000010987
- HOGENOM:   HBG658957
- OMA:   LRAVNHW
- ProtClustDB:   CLSK880763
- BioCyc:   ECOL83334:ECS4617-MONOMER
- InterPro:   IPR003807

Pfam domain/function: PF02656 DUF202

EC number: NA

Molecular weight: Translated: 12780; Mature: 12780

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x155fe510)-; HASH(0x1441ad64)-; HASH(0x160626f0)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAPDFATPVIRELLALLLC
CCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHCCHHHHHHHHHHHH
LFSGGLAMYGYLRWLRNEKAMRLKEDLPYTNSLLIISLILMVVAVIVMGLVLYAG
HHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MKISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAPDFATPVIRELLALLLC
CCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHCCHHHHHHHHHHHH
LFSGGLAMYGYLRWLRNEKAMRLKEDLPYTNSLLIISLILMVVAVIVMGLVLYAG
HHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796