Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is yidG
Identifier: 30064988
GI number: 30064988
Start: 3877471
End: 3877833
Strand: Reverse
Name: yidG
Synonym: S3982
Alternate gene names: 30064988
Gene position: 3877833-3877471 (Counterclockwise)
Preceding gene: 30064989
Following gene: 30064987
Centisome position: 84.31
GC content: 50.69
Gene sequence:
>363_bases ATGCCGGATAGCCGTAAAGCCAGACGCATTGCCGACCCAGGGCTGCAGCCGGAGCGCACATCACTGGCGTGGTTTCGTAC CATGCTGGGCTACGGCGCGTTGATGGCGTTGGCTATCAAACACAACTGGCACCAGGCGGGCATGTTATTCTGGATTTCGA TTGGCATCCTCGCCATCGTGGCGCTGATCCTCTGGCACTACACCCGTAATCGCAATTTAATGGATGTCACGAATAGCGAT TTTTCCCAATTTCACGTAGTCCGTGACAAATTTTTGATCTCCCTCGCGGTGTTATCTCTCGCAATACTGTTTGCTGTAAC GCATATACATCAACTTATCGTATTTATTGAGAGAGTCGCATGA
Upstream 100 bases:
>100_bases GCGATGCGTCTGAAAGAGGACCTGCCCTACACCAACAGCTTATTAATCATCAGCTTAATATTGATGGTTGTGGCGGTGAT CGTTATGGGACTGGTGTTGT
Downstream 100 bases:
>100_bases CAGGAAGTCAGGTCATTGATGCTGAAGAGGACAGGCATAAGCTGGTTGTAGAGTACAAGGATGCTCTGCAACCTGCCGAT TTTTATCACAATTTCAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MPDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAIKHNWHQAGMLFWISIGILAIVALILWHYTRNRNLMDVTNSD FSQFHVVRDKFLISLAVLSLAILFAVTHIHQLIVFIERVA
Sequences:
>Translated_120_residues MPDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAIKHNWHQAGMLFWISIGILAIVALILWHYTRNRNLMDVTNSD FSQFHVVRDKFLISLAVLSLAILFAVTHIHQLIVFIERVA >Mature_119_residues PDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAIKHNWHQAGMLFWISIGILAIVALILWHYTRNRNLMDVTNSDF SQFHVVRDKFLISLAVLSLAILFAVTHIHQLIVFIERVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790109, Length=120, Percent_Identity=100, Blast_Score=243, Evalue=2e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YIDG_ECO57 (P0ADL8)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: B86052 - PIR: H91205 - RefSeq: NP_290314.1 - RefSeq: NP_312643.1 - ProteinModelPortal: P0ADL8 - EnsemblBacteria: EBESCT00000024085 - EnsemblBacteria: EBESCT00000059750 - GeneID: 915418 - GeneID: 960789 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z5170 - KEGG: ecs:ECs4616 - GeneTree: EBGT00050000009039 - HOGENOM: HBG416451 - OMA: WHRAGLP - ProtClustDB: CLSK880762 - BioCyc: ECOL83334:ECS4616-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13769; Mature: 13637
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1484a144)-; HASH(0x15ae3754)-; HASH(0x15edbf30)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAIKHNWHQAGMLFWISIGILAIV CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ALILWHYTRNRNLMDVTNSDFSQFHVVRDKFLISLAVLSLAILFAVTHIHQLIVFIERVA HHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure PDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAIKHNWHQAGMLFWISIGILAIV CCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ALILWHYTRNRNLMDVTNSDFSQFHVVRDKFLISLAVLSLAILFAVTHIHQLIVFIERVA HHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796